RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	HLA-DMB	P28068	263 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	ASIP	P42127	132 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	FOXA3	P55318	350 aa	Predicted RBP	4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	PMCHL1	Q16048	86 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	RNF182	Q8N6D2	247 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	LINC00526	Q96FQ7	95 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	IGF2BP2-AS1	Q96M15	143 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	WFDC10A	Q9H1F0	79 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638		Q9H3A6	140 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	TMEM242	Q9NWH2	141 aa		4.53	□□□□□ -1.68
ECHDC1-208	ENST00000436638	IGKV3-20	P01619	116 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	SLC25A5	P05141	298 aa	Known RBP	4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	FRMD6-AS1	P0C7T7	363 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	HLA-DRB4	P13762	266 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	ZNF493	Q6ZR52	646 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	OR8A1	Q8NGG7	326 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	DPH3	Q96FX2	82 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PMCHL2	Q9BQD1	86 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	OTOR	Q9NRC9	128 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	HLA-DRB4	X5D2U9	266 aa		4.52	□□□□□ -1.69
ECHDC1-208	ENST00000436638	STAB1	Q9NY15	2570 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638		A0A0J9YX75	114 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PLAC8L1	A1L4L8	177 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638		F6UB75	175 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638		H3BMM0	161 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638		M0R3E3	92 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	CXCL1	P09341	107 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	DAD1	P61803	113 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	SLC25A34	Q6PIV7	304 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PRR15	Q8IV56	129 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	COPS9	Q8WXC6	57 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	MANBAL	Q9NQG1	85 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	GNG13	Q9P2W3	67 aa		4.51	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TRBV20-1	A0A075B6N2	111 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TRAV1-1	A0A0B4J248	108 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638		A0A1W2PPM0	123 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	RBMY1B	A6NDE4	496 aa	Known RBP	4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	RBMY1E	A6NEQ0	496 aa	Known RBP	4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	APOM	O95445	188 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	RBMY1D	P0C7P1	496 aa	Known RBP	4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	DEFB1	P60022	68 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	ARL2-SNX15	V9GYD0	113 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	SORL1	Q92673	2214 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	DNHD1	Q96M86	4753 aa		4.5	□□□□□ -1.69
ECHDC1-208	ENST00000436638	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	RBAKDN	A6NC62	111 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	C8orf87	E5RJ46	101 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638		M0R2P5	195 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	IGKV2D-40	P01614	121 aa	Predicted RBP	4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TRAC	P01848	142 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PRB4	P10163	310 aa	Predicted RBP	4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	CRYGA	P11844	174 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	FXYD7	P58549	80 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	UBE2G1	P62253	170 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	ERCC8	Q13216	396 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PIK3CD-AS1	Q5SR53	167 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	GDF5OS	Q5U4N7	250 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	BRK1	Q8WUW1	75 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	B9D2	Q9BPU9	175 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TXNDC17	Q9BRA2	123 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	SLC35B3	Q9H1N7	401 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	RBM12B-AS1	Q9P1G2	102 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	EPDR1	Q9UM22	224 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	NOTCH3	Q9UM47	2321 aa		4.49	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TRAV13-1	A0A0B4J241	112 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	MUC21	A0A0G2JKD1	596 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	MUC21	A0A140T8X8	626 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	C11orf94	C9JXX5	98 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PRAC2	D3DTV9	90 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	NDUFC2-KCTD14	E9PQ53	114 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PEX7	O00628	323 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	INS	P01308	110 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TCRA	P04437	139 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	ZNF138	P52744	262 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	SPINK13	Q1W4C9	94 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	MUC21	Q5SSG8	566 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	C9orf47	Q6ZRZ4	202 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638		Q75L30	129 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	SBSPON	Q8IVN8	264 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	CYB561D1	Q8N8Q1	229 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	OR10G8	Q8NGN5	311 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	NTN5	Q8WTR8	489 aa	Predicted RBP	4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	ODF3	Q96PU9	254 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	IMUP	Q9GZP8	106 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	AGPAT4-IT1	Q9H0P7	198 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	XCL2	Q9UBD3	114 aa		4.48	□□□□□ -1.69
ECHDC1-208	ENST00000436638	IGHV3OR16-12	A0A075B7B8	117 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TRAV9-2	A0A087WT02	112 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638		A0A1B0GXF2	115 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638		H3BMG7	143 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	CCL20	P78556	96 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	DEFB135	Q30KP9	77 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	MPV17L2	Q567V2	206 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638		Q6ZWC4	215 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	ATP5L2	Q7Z4Y8	100 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PRNT	Q86SH4	94 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PPDPFL	Q8WWR9	84 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	TVP23C	Q96ET8	276 aa		4.47	□□□□□ -1.69
ECHDC1-208	ENST00000436638	PRELID3A	Q96N28	172 aa		4.47	□□□□□ -1.69

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