RNA–Protein interactions for RNA: ENST00000436592.5

LINC01554-202, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best) BASIC

Gene LINC01554, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-202ENST00000436592 PLAC8L1A1L4L8 177 aa12.69□□□□□ -0.38
LINC01554-202ENST00000436592 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
LINC01554-202ENST00000436592 E9PLD3 99 aa12.69□□□□□ -0.38
LINC01554-202ENST00000436592 SEC11AP67812 179 aa12.69□□□□□ -0.38
LINC01554-202ENST00000436592 ORAOV1Q8WV07 137 aa12.69□□□□□ -0.38
LINC01554-202ENST00000436592 IGHV3-38A0A0C4DH36 116 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 DAZ2Q13117 558 aaKnown RBP12.68□□□□□ -0.38
LINC01554-202ENST00000436592 PAPPA-AS1Q5QFB9 102 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
LINC01554-202ENST00000436592 OR11H2Q8NH07 326 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 CHAC1Q9BUX1 264 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 TEP1Q99973 2627 aaKnown RBP12.68□□□□□ -0.38
LINC01554-202ENST00000436592 IGLV4-3A0A075B6K6 122 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 GAGE1Q13065 139 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
LINC01554-202ENST00000436592 C16orf74Q96GX8 76 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
LINC01554-202ENST00000436592 FAM104AQ969W3 186 aa12.67□□□□□ -0.38
LINC01554-202ENST00000436592 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
LINC01554-202ENST00000436592 NPSP0C0P6 89 aa12.66□□□□□ -0.38
LINC01554-202ENST00000436592 CEMP1Q6PRD7 247 aaPredicted RBP12.66□□□□□ -0.38
LINC01554-202ENST00000436592 PYGO1Q9Y3Y4 419 aa12.66□□□□□ -0.38
LINC01554-202ENST00000436592 TRAV4A0A0B4J268 109 aa12.66□□□□□ -0.38
LINC01554-202ENST00000436592 RRN3P1Q2M238 152 aa12.66□□□□□ -0.38
LINC01554-202ENST00000436592 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
LINC01554-202ENST00000436592 INSL3P51460 131 aa12.65□□□□□ -0.38
LINC01554-202ENST00000436592 CITED1Q99966 193 aa12.65□□□□□ -0.38
LINC01554-202ENST00000436592 VCX2Q9H322 139 aa12.65□□□□□ -0.38
LINC01554-202ENST00000436592 TMEM170BQ5T4T1 132 aa12.65□□□□□ -0.39
LINC01554-202ENST00000436592 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
LINC01554-202ENST00000436592 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
LINC01554-202ENST00000436592 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.63□□□□□ -0.39
LINC01554-202ENST00000436592 GAGE12BA1L429 117 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 IGKV2-29A2NJV5 120 aaPredicted RBP12.63□□□□□ -0.39
LINC01554-202ENST00000436592 K7EP13 123 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 GAGE7O76087 117 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 GAGE12FP0CL80 117 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 GAGE12GP0CL81 117 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 GAGE12IP0CL82 117 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 COTL1Q14019 142 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 OVOL2Q9BRP0 275 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 F8P00451 2351 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 TRBV7-3A0A075B6L6 115 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 A6NDN8 102 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 GCSHP23434 173 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 SLC25A29Q8N8R3 303 aa12.63□□□□□ -0.39
LINC01554-202ENST00000436592 K7EQD1 137 aa12.62□□□□□ -0.39
LINC01554-202ENST00000436592 AMELXQ99217 191 aa12.62□□□□□ -0.39
LINC01554-202ENST00000436592 NBEAL2Q6ZNJ1 2754 aa12.62□□□□□ -0.39
LINC01554-202ENST00000436592 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
LINC01554-202ENST00000436592 A0A0J9YXV3 536 aa12.61□□□□□ -0.39
LINC01554-202ENST00000436592 FXYD2P54710 66 aa12.61□□□□□ -0.39
LINC01554-202ENST00000436592 HERVK_113P61574 105 aa12.61□□□□□ -0.39
LINC01554-202ENST00000436592 UBE2D4Q9Y2X8 147 aa12.61□□□□□ -0.39
LINC01554-202ENST00000436592 TRBV10-1A0A0K0K1A3 114 aa12.61□□□□□ -0.39
LINC01554-202ENST00000436592 RNASE13Q5GAN3 156 aaKnown RBP12.61□□□□□ -0.39
LINC01554-202ENST00000436592 ZNF815PA8K554 130 aa12.6□□□□□ -0.39
LINC01554-202ENST00000436592 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
LINC01554-202ENST00000436592 CEND1Q8N111 149 aa12.6□□□□□ -0.39
LINC01554-202ENST00000436592 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
LINC01554-202ENST00000436592 TM2D2Q9BX73 214 aa12.6□□□□□ -0.39
LINC01554-202ENST00000436592 SPANXA1Q9NS26 97 aa12.6□□□□□ -0.39
LINC01554-202ENST00000436592 TSPEAR-AS2P59090 65 aa12.59□□□□□ -0.39
LINC01554-202ENST00000436592 H3BRM9 83 aa12.58□□□□□ -0.39
LINC01554-202ENST00000436592 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.39
LINC01554-202ENST00000436592 CRYBA4P53673 196 aa12.58□□□□□ -0.39
LINC01554-202ENST00000436592 VAMP3Q15836 100 aa12.58□□□□□ -0.39
LINC01554-202ENST00000436592 GAGE12JA6NER3 117 aa12.58□□□□□ -0.4
LINC01554-202ENST00000436592 GAGE4Q13068 117 aa12.58□□□□□ -0.4
LINC01554-202ENST00000436592 GAGE5Q13069 117 aa12.58□□□□□ -0.4
LINC01554-202ENST00000436592 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
LINC01554-202ENST00000436592 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
LINC01554-202ENST00000436592 HIST1H4GQ99525 98 aa12.58□□□□□ -0.4
LINC01554-202ENST00000436592 TMEM223A0PJW6 202 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 CCL25O15444 150 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 UBE2D3P61077 147 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 UBE2D2P62837 147 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 UBE2V1Q13404 147 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 TAL2Q16559 108 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 TRRAPQ9Y4A5 3859 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 PTTG1IPP53801 180 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 NTM-AS1Q6ZSK4 140 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 Q6ZUT4 128 aa12.57□□□□□ -0.4
LINC01554-202ENST00000436592 MRPS36P82909 103 aaKnown RBP12.56□□□□□ -0.4
LINC01554-202ENST00000436592 DAZ4Q86SG3 579 aaKnown RBP12.56□□□□□ -0.4
LINC01554-202ENST00000436592 RAB37Q96AX2 223 aa12.56□□□□□ -0.4
LINC01554-202ENST00000436592 DAZ3Q9NR90 486 aaKnown RBP12.56□□□□□ -0.4
LINC01554-202ENST00000436592 AMMECR1LQ6DCA0 310 aa12.55□□□□□ -0.4
LINC01554-202ENST00000436592 LOC100131303A0A0U1RQF7 123 aa12.55□□□□□ -0.4
LINC01554-202ENST00000436592 C9orf118A6NHY6 69 aa12.55□□□□□ -0.4
LINC01554-202ENST00000436592 J3QQQ9 107 aa12.55□□□□□ -0.4
LINC01554-202ENST00000436592 SCGB1D4Q6XE38 83 aa12.55□□□□□ -0.4
LINC01554-202ENST00000436592 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
LINC01554-202ENST00000436592 CIDEAO60543 219 aa12.54□□□□□ -0.4
LINC01554-202ENST00000436592 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
LINC01554-202ENST00000436592 NAA38Q9BRA0 125 aaKnown RBP12.54□□□□□ -0.4
LINC01554-202ENST00000436592 X6R8D5 127 aa12.54□□□□□ -0.4
LINC01554-202ENST00000436592 IGHV3-64A0A075B6Q5 118 aa12.53□□□□□ -0.4
LINC01554-202ENST00000436592 TRBV6-4A0A1B0GX49 114 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms