RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 DEFB4AO15263 64 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 P0C879 139 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 BRWD1-AS2P59051 145 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 C22orf34Q6ZV56 151 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 Q8N7P7 452 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 MED14OSP0DP75 135 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
PTPRU-204ENST00000428026 H3BQ85 93 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 NDUFA1O15239 70 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 PROP1O75360 226 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 TMEM256-PLSCR3K7ERE1 68 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 KIAA1549LQ6ZVL6 1849 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 DIRC1Q969H9 104 aa11□□□□□ -0.65
PTPRU-204ENST00000428026 YPEL4Q96NS1 127 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 FAM110AQ9BQ89 295 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 UBE2AP49459 152 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 SPAG11BQ08648 103 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 CCL18P55774 89 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 V9GYY9 64 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 SPTBN4Q9H254 2564 aa10.99□□□□□ -0.65
PTPRU-204ENST00000428026 SPTSSBQ8NFR3 76 aa10.98□□□□□ -0.65
PTPRU-204ENST00000428026 MBD6Q96DN6 1003 aa10.98□□□□□ -0.65
PTPRU-204ENST00000428026 TM2D2Q9BX73 214 aa10.98□□□□□ -0.65
PTPRU-204ENST00000428026 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
PTPRU-204ENST00000428026 ABCA2Q9BZC7 2435 aa10.98□□□□□ -0.65
PTPRU-204ENST00000428026 C9orf66Q5T8R8 295 aa10.98□□□□□ -0.65
PTPRU-204ENST00000428026 UQCRQO14949 82 aa10.97□□□□□ -0.65
PTPRU-204ENST00000428026 SLPIP03973 132 aa10.97□□□□□ -0.65
PTPRU-204ENST00000428026 SCXQ7RTU7 201 aa10.97□□□□□ -0.65
PTPRU-204ENST00000428026 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
PTPRU-204ENST00000428026 KLK12Q9UKR0 248 aa10.97□□□□□ -0.65
PTPRU-204ENST00000428026 NEXN-AS1Q8NBZ9 246 aa10.97□□□□□ -0.65
PTPRU-204ENST00000428026 SIRPDQ9H106 197 aa10.96□□□□□ -0.66
PTPRU-204ENST00000428026 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.66
PTPRU-204ENST00000428026 C1orf229Q6ZS94 237 aaPredicted RBP10.96□□□□□ -0.66
PTPRU-204ENST00000428026 A0A0J9YX75 114 aa10.95□□□□□ -0.66
PTPRU-204ENST00000428026 C10orf142B7Z368 130 aa10.95□□□□□ -0.66
PTPRU-204ENST00000428026 IGF1P05019 195 aa10.95□□□□□ -0.66
PTPRU-204ENST00000428026 CHD8Q9HCK8 2581 aa10.95□□□□□ -0.66
PTPRU-204ENST00000428026 TRIAP1O43715 76 aa10.95□□□□□ -0.66
PTPRU-204ENST00000428026 F8W735 103 aaPredicted RBP10.94□□□□□ -0.66
PTPRU-204ENST00000428026 H0Y9J4 135 aa10.94□□□□□ -0.66
PTPRU-204ENST00000428026 CXCL5P42830 114 aa10.94□□□□□ -0.66
PTPRU-204ENST00000428026 K7EMT4 169 aa10.94□□□□□ -0.66
PTPRU-204ENST00000428026 ENHOQ6UWT2 76 aa10.94□□□□□ -0.66
PTPRU-204ENST00000428026 MUC22E2RYF6 1773 aaPredicted RBP10.93□□□□□ -0.66
PTPRU-204ENST00000428026 FAM236DA0A1B0GTK5 79 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 FAM236CP0DP71 79 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 C3orf22Q8N5N4 141 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 CCDC140Q96MF4 163 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 CRIP3Q6Q6R5 217 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 ANKRD11Q6UB99 2663 aaPredicted RBP10.93□□□□□ -0.66
PTPRU-204ENST00000428026 LINC01548A6NM66 108 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 MRPS12O15235 138 aaKnown RBP10.93□□□□□ -0.66
PTPRU-204ENST00000428026 GPHB5Q86YW7 130 aa10.93□□□□□ -0.66
PTPRU-204ENST00000428026 COX7BP24311 80 aa10.92□□□□□ -0.66
PTPRU-204ENST00000428026 DEFB135Q30KP9 77 aa10.92□□□□□ -0.66
PTPRU-204ENST00000428026 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
PTPRU-204ENST00000428026 CRIP1P50238 77 aa10.92□□□□□ -0.66
PTPRU-204ENST00000428026 PIK3CD-AS1Q5SR53 167 aa10.92□□□□□ -0.66
PTPRU-204ENST00000428026 BPY2O14599 106 aa10.91□□□□□ -0.66
PTPRU-204ENST00000428026 LINC00467Q9BRT7 94 aa10.91□□□□□ -0.66
PTPRU-204ENST00000428026 SEC61GP60059 68 aa10.91□□□□□ -0.66
PTPRU-204ENST00000428026 C2orf91Q6ZV80 131 aa10.91□□□□□ -0.66
PTPRU-204ENST00000428026 TMEM223A0PJW6 202 aa10.9□□□□□ -0.66
PTPRU-204ENST00000428026 PLA2G2AP14555 144 aa10.9□□□□□ -0.66
PTPRU-204ENST00000428026 ZNF106Q9H2Y7 1883 aaKnown RBP10.9□□□□□ -0.66
PTPRU-204ENST00000428026 LMO4P61968 165 aa10.9□□□□□ -0.66
PTPRU-204ENST00000428026 MED12LQ86YW9 2145 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 CCDC179H3BU77 68 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 C4orf48Q5BLP8 95 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 PLXNB1O43157 2135 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 INAFM1C9JVW0 142 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 LRRC75A-AS1Q8N1F1 130 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 NCOA6Q14686 2063 aaPredicted RBP10.89□□□□□ -0.67
PTPRU-204ENST00000428026 PDE6GP18545 87 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 INSL3P51460 131 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 A8MZ25 164 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 Q6ZTI0 123 aa10.89□□□□□ -0.67
PTPRU-204ENST00000428026 TMEM263Q8WUH6 116 aaKnown RBP10.88□□□□□ -0.67
PTPRU-204ENST00000428026 IGKV4-1P06312 121 aa10.88□□□□□ -0.67
PTPRU-204ENST00000428026 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
PTPRU-204ENST00000428026 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
PTPRU-204ENST00000428026 LINC00308Q8TCZ7 52 aa10.88□□□□□ -0.67
PTPRU-204ENST00000428026 RNF185Q96GF1 192 aa10.88□□□□□ -0.67
PTPRU-204ENST00000428026 DSCAMO60469 2012 aa10.87□□□□□ -0.67
PTPRU-204ENST00000428026 FAM240AA0A1B0GVK7 77 aa10.87□□□□□ -0.67
PTPRU-204ENST00000428026 PCNX3Q9H6A9 2034 aa10.87□□□□□ -0.67
PTPRU-204ENST00000428026 LINC00269Q8N2A0 174 aa10.87□□□□□ -0.67
PTPRU-204ENST00000428026 MAP6D1Q9H9H5 199 aa10.87□□□□□ -0.67
PTPRU-204ENST00000428026 IGHV4-31P0DP07 118 aa10.86□□□□□ -0.67
PTPRU-204ENST00000428026 XGP55808 180 aa10.86□□□□□ -0.67
PTPRU-204ENST00000428026 CDSNQ15517 529 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms