RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CFC1BP0CG36 223 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 CFC1P0CG37 223 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 CFAP126Q5VTH2 177 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 C16orf95Q9H693 158 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 GAGE12HA6NDE8 117 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 Q6ZUT4 128 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 K7ERJ3 54 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 CRIP1P50238 77 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
RPL28-202ENST00000426763 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 DCANP1Q8TF63 244 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 RNF183Q96D59 192 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 RS1O15537 224 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 WFDC10AQ9H1F0 79 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 TRAV10A0A0B4J240 114 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 ZNF580Q9UK33 172 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 RAI1Q7Z5J4 1906 aaPredicted RBP10.3□□□□□ -0.76
RPL28-202ENST00000426763 H7C423 109 aa10.3□□□□□ -0.76
RPL28-202ENST00000426763 DSCR8Q96T75 97 aa10.29□□□□□ -0.76
RPL28-202ENST00000426763 E9PLD3 99 aa10.29□□□□□ -0.76
RPL28-202ENST00000426763 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
RPL28-202ENST00000426763 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
RPL28-202ENST00000426763 SPTBN4Q9H254 2564 aa10.29□□□□□ -0.76
RPL28-202ENST00000426763 REG3AQ06141 175 aa10.29□□□□□ -0.76
RPL28-202ENST00000426763 CEMP1Q6PRD7 247 aaPredicted RBP10.29□□□□□ -0.76
RPL28-202ENST00000426763 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
RPL28-202ENST00000426763 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 HCFC1P51610 2035 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 IGHV1-58A0A0C4DH39 117 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 CARD19Q96LW7 228 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 KLLNB2CW77 178 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 ODF1Q14990 250 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 MUSTN1Q8IVN3 82 aa10.28□□□□□ -0.76
RPL28-202ENST00000426763 A0A1W2PPM0 123 aa10.27□□□□□ -0.76
RPL28-202ENST00000426763 BRI3O95415 125 aa10.27□□□□□ -0.76
RPL28-202ENST00000426763 OXLD1Q5BKU9 147 aa10.27□□□□□ -0.76
RPL28-202ENST00000426763 CRYGDP07320 174 aa10.27□□□□□ -0.76
RPL28-202ENST00000426763 K7EP34 96 aa10.26□□□□□ -0.77
RPL28-202ENST00000426763 M0QY20 66 aa10.26□□□□□ -0.77
RPL28-202ENST00000426763 C15orf53Q8NAA6 179 aa10.26□□□□□ -0.77
RPL28-202ENST00000426763 LINC00467Q9BRT7 94 aa10.26□□□□□ -0.77
RPL28-202ENST00000426763 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
RPL28-202ENST00000426763 F8W1H4 67 aa10.25□□□□□ -0.77
RPL28-202ENST00000426763 DEFB105AQ8NG35 78 aa10.25□□□□□ -0.77
RPL28-202ENST00000426763 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
RPL28-202ENST00000426763 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
RPL28-202ENST00000426763 H0YGX0 51 aa10.25□□□□□ -0.77
RPL28-202ENST00000426763 CENPFP49454 3210 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 A4D1N5 150 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
RPL28-202ENST00000426763 IGHV4-4A0A075B6R2 117 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 IGHV4-30-4P0DP06 118 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 PRR9Q5T870 116 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 ZFAND6Q6FIF0 208 aa10.24□□□□□ -0.77
RPL28-202ENST00000426763 IGLV1-51P01701 117 aa10.23□□□□□ -0.77
RPL28-202ENST00000426763 DAND5Q8N907 189 aa10.23□□□□□ -0.77
RPL28-202ENST00000426763 CHCHD10Q8WYQ3 142 aaPredicted RBP10.23□□□□□ -0.77
RPL28-202ENST00000426763 CHD8Q9HCK8 2581 aa10.23□□□□□ -0.77
RPL28-202ENST00000426763 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
RPL28-202ENST00000426763 UBE2AP49459 152 aa10.23□□□□□ -0.77
RPL28-202ENST00000426763 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
RPL28-202ENST00000426763 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
RPL28-202ENST00000426763 NCR3O14931 201 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 HIGD1BQ9P298 99 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 ODF3L2Q3SX64 289 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 MIR7-3HGQ8N6C7 128 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 TANC2Q9HCD6 1990 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 PCP4P48539 62 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 MYO9AB2RTY4 2548 aa10.22□□□□□ -0.77
RPL28-202ENST00000426763 CRYBA4P53673 196 aa10.21□□□□□ -0.77
RPL28-202ENST00000426763 PROK1P58294 105 aa10.21□□□□□ -0.77
RPL28-202ENST00000426763 C9orf85Q96MD7 179 aa10.21□□□□□ -0.78
RPL28-202ENST00000426763 H3BMG7 143 aa10.21□□□□□ -0.78
RPL28-202ENST00000426763 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.78
RPL28-202ENST00000426763 PRB2P02812 416 aaPredicted RBP10.2□□□□□ -0.78
RPL28-202ENST00000426763 EDN2P20800 178 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 SPATA12Q7Z6I5 190 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 RNF185Q96GF1 192 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 C11orf21Q9P2W6 132 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 ETDBQ3ZM63 59 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 UFSP1Q6NVU6 142 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 HAMPP81172 84 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 KPRPQ5T749 579 aaPredicted RBP10.2□□□□□ -0.78
RPL28-202ENST00000426763 CDPF1Q6NVV7 123 aa10.2□□□□□ -0.78
RPL28-202ENST00000426763 SORL1Q92673 2214 aa10.19□□□□□ -0.78
RPL28-202ENST00000426763 MRPS12O15235 138 aaKnown RBP10.19□□□□□ -0.78
RPL28-202ENST00000426763 U3KQK5 164 aa10.19□□□□□ -0.78
RPL28-202ENST00000426763 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
RPL28-202ENST00000426763 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
RPL28-202ENST00000426763 ZNF462Q96JM2 2506 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms