RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 BPESC1Q9GZL8 116 aa9.41□□□□□ -0.9
TOP2B-203ENST00000424225 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
TOP2B-203ENST00000424225 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 NPFFO15130 113 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 GAGE7O76087 117 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 GAGE4Q13068 117 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 FBXL19-AS1Q494R0 122 aa9.4□□□□□ -0.9
TOP2B-203ENST00000424225 IGHV1-69P01742 117 aa9.4□□□□□ -0.91
TOP2B-203ENST00000424225 NDUFA4O00483 81 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 K7ENP7 123 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 HERVK_113P61574 105 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
TOP2B-203ENST00000424225 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 USP9YO00507 2555 aaPredicted RBP9.39□□□□□ -0.91
TOP2B-203ENST00000424225 ANK3Q12955 4377 aaKnown RBP9.39□□□□□ -0.91
TOP2B-203ENST00000424225 A0A0J9YX75 114 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 COX6A2Q02221 97 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 FOXC1Q12948 553 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 LY6EQ16553 131 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 UBTD1Q9HAC8 227 aa9.39□□□□□ -0.91
TOP2B-203ENST00000424225 TEX15Q9BXT5 2789 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 SNCGO76070 127 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 NDUFA7O95182 113 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 MRPS36P82909 103 aaKnown RBP9.38□□□□□ -0.91
TOP2B-203ENST00000424225 DEFB121Q5J5C9 76 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 TMEM262E9PQX1 116 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 ATXN8Q156A1 80 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 ZNF56Q15929 161 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
TOP2B-203ENST00000424225 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
TOP2B-203ENST00000424225 H3BMM0 161 aa9.37□□□□□ -0.91
TOP2B-203ENST00000424225 Q6Q795 121 aa9.37□□□□□ -0.91
TOP2B-203ENST00000424225 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
TOP2B-203ENST00000424225 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
TOP2B-203ENST00000424225 CHCHD7Q9BUK0 85 aa9.37□□□□□ -0.91
TOP2B-203ENST00000424225 PAPPA-AS1Q5QFB9 102 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 LST1O00453 97 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 CFHR3Q02985 330 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
TOP2B-203ENST00000424225 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 Q1RN00 199 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 SPTBN4Q9H254 2564 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 SCGB2A1O75556 95 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 PRSS2P07478 247 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
TOP2B-203ENST00000424225 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
TOP2B-203ENST00000424225 AVPP01185 164 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
TOP2B-203ENST00000424225 KLK5Q9Y337 293 aaPredicted RBP9.35□□□□□ -0.91
TOP2B-203ENST00000424225 DUX5Q96PT3 197 aa9.34□□□□□ -0.91
TOP2B-203ENST00000424225 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
TOP2B-203ENST00000424225 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
TOP2B-203ENST00000424225 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.91
TOP2B-203ENST00000424225 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.91
TOP2B-203ENST00000424225 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
TOP2B-203ENST00000424225 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.91
TOP2B-203ENST00000424225 MIAQ16674 131 aa9.34□□□□□ -0.91
TOP2B-203ENST00000424225 POLQO75417 2590 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 LYRM7Q5U5X0 104 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 MOB4Q9Y3A3 225 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 KMT2BQ9UMN6 2715 aaPredicted RBP9.33□□□□□ -0.92
TOP2B-203ENST00000424225 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 PPP1R17O96001 155 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 TIMM21Q9BVV7 248 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 UBE2D4Q9Y2X8 147 aa9.33□□□□□ -0.92
TOP2B-203ENST00000424225 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 LINC00467Q9BRT7 94 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 RHOHQ15669 191 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 CCDC168Q8NDH2 2452 aa9.32□□□□□ -0.92
TOP2B-203ENST00000424225 IGHV1OR15-1A0A075B7D0 117 aa9.31□□□□□ -0.92
TOP2B-203ENST00000424225 A0A0U1RRA0 63 aa9.31□□□□□ -0.92
TOP2B-203ENST00000424225 CD28P10747 220 aa9.31□□□□□ -0.92
TOP2B-203ENST00000424225 PF4V1P10720 104 aa9.31□□□□□ -0.92
TOP2B-203ENST00000424225 ZNF625Q96I27 306 aaPredicted RBP9.31□□□□□ -0.92
TOP2B-203ENST00000424225 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
TOP2B-203ENST00000424225 TMEM101Q96IK0 257 aa9.3□□□□□ -0.92
TOP2B-203ENST00000424225 VPREB3Q9UKI3 123 aa9.3□□□□□ -0.92
TOP2B-203ENST00000424225 USP9XQ93008 2570 aaPredicted RBP9.3□□□□□ -0.92
TOP2B-203ENST00000424225 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
TOP2B-203ENST00000424225 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms