RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 IGKV3D-7A0A0C4DH55 119 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 LINC01546A6NGU7 62 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 TMEM14DPA8MWL7 114 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 BAALC-AS2P0C853 105 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 PRB4P10163 310 aaPredicted RBP1.93□□□□□ -2.1
PMS1-209ENST00000424059 IGLV3-21P80748 117 aaPredicted RBP1.93□□□□□ -2.1
PMS1-209ENST00000424059 TIAM2Q8IVF5 1701 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 C20orf203Q8NBC4 194 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 CSNK1G2-AS1Q8NCQ2 148 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
PMS1-209ENST00000424059 COL11A1P12107 1806 aaPredicted RBP1.92□□□□□ -2.1
PMS1-209ENST00000424059 IGHV3-43A0A0B4J1X8 118 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 TRBV7-4A0A0J9YYF1 115 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 ZNF815PA8K554 130 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 LY6HO94772 140 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 IGHV3-30P01768 117 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 IGHV3-30-5P0DP03 117 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 CMC4P56277 68 aaPredicted RBP1.92□□□□□ -2.1
PMS1-209ENST00000424059 EDDM3BP56851 147 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 RPL38P63173 70 aaKnown RBP1.92□□□□□ -2.1
PMS1-209ENST00000424059 LYPD6Q86Y78 171 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 LINC01560Q8TB33 94 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 MYOFQ9NZM1 2061 aa1.92□□□□□ -2.1
PMS1-209ENST00000424059 IGHV3-74A0A0B4J1X5 117 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 CHKB-CPT1BH3BT56 60 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 PSCAO43653 123 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 IGHV3-30-3P0DP02 117 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 ROMO1P60602 79 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 FXYD3Q14802 87 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 C1orf134Q5TEV5 83 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 Q8NDZ9 215 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 WFDC6Q9BQY6 131 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 FGF23Q9GZV9 251 aaPredicted RBP1.91□□□□□ -2.1
PMS1-209ENST00000424059 CDC42SE2Q9NRR3 84 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 S4R3C0 116 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 U3KQK5 164 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 PLXNB2O15031 1838 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 BRWD3Q6RI45 1802 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 TRAV23DV6A0A075B6W5 121 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 IGHV5-10-1A0A0J9YXX1 117 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 A0A0J9YY99 117 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 LOC101927531A0A1B0GV80 90 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 LHBP01229 141 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 COX6B1P14854 86 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 FXYD7P58549 80 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 C22orf24Q9Y442 160 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 LHFPL6Q9Y693 200 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 KIF25-AS1Q9Y6Z4 181 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 ZNF831Q5JPB2 1677 aa1.91□□□□□ -2.1
PMS1-209ENST00000424059 ABCA7Q8IZY2 2146 aa1.9□□□□□ -2.1
PMS1-209ENST00000424059 NACAE9PAV3 2078 aa1.9□□□□□ -2.1
PMS1-209ENST00000424059 C11orf86A6NJI1 115 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 SRRM5B3KS81 715 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 IGLV2-23P01705 113 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-13P01766 116 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 TFF1P04155 84 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 COX6CP09669 75 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 ARMS2P0C7Q2 107 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 COX7A1P24310 79 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 LCE3AQ5TA76 89 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 LYPD2Q6UXB3 125 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 Q6ZS52 159 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 CNEP1R1Q8N9A8 125 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 HEATR1Q9H583 2144 aaKnown RBP1.9□□□□□ -2.11
PMS1-209ENST00000424059 MPDZO75970 2070 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 IGLV3-16A0A075B6K0 115 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 HIGD1CA8MV81 97 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-11P01762 117 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 PLNP26678 52 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 EIF4EBP1Q13541 118 aaPredicted RBP1.9□□□□□ -2.11
PMS1-209ENST00000424059 PRR4Q16378 134 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 CASC10Q5T4H9 136 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 C1orf64Q8NEQ6 169 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 IMMP1LQ96LU5 166 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 OBSCN-AS1Q96MR7 158 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 C8orf17Q9NRJ1 99 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 LINC00846Q9NV44 126 aa1.9□□□□□ -2.11
PMS1-209ENST00000424059 LTBP1Q14766 1721 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 MED13Q9UHV7 2174 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 TRAV12-1A0A0B4J245 112 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 TRAV40A0A0B4J280 105 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 SOCS3O14543 225 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 IGHV1-69P01742 117 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 CD24P25063 80 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 C10orf128Q5T292 105 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 C9orf66Q5T8R8 295 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 TMEM254Q8TBM7 123 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 TIMM8BQ9Y5J9 83 aaPredicted RBP1.89□□□□□ -2.11
PMS1-209ENST00000424059 ICOSQ9Y6W8 199 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 MYO7AQ13402 2215 aa1.89□□□□□ -2.11
PMS1-209ENST00000424059 A0A1W2PNU3 283 aaPredicted RBP1.88□□□□□ -2.11
PMS1-209ENST00000424059 TRGV3P03979 118 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 CLPSP04118 112 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 MIAQ16674 131 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 RNASE13Q5GAN3 156 aaKnown RBP1.88□□□□□ -2.11
PMS1-209ENST00000424059 CASC2Q6XLA1 102 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 NPBQ8NG41 125 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 ZNF355PQ9NSJ1 428 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms