RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 TRGV3P03979 118 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 SLC25A29Q8N8R3 303 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 FAM110DQ8TAY7 271 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-205ENST00000423113 U3KQE9 123 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 SPTAN1Q13813 2472 aaKnown RBP3.7□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV3OR16-13A0A075B7E8 117 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV3-74A0A0B4J1X5 117 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 C19orf54Q5BKX5 351 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 Q8N6K4 173 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 C14orf178Q8N769 122 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-205ENST00000423113 IL17DQ8TAD2 202 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 CCL13Q99616 98 aa3.7□□□□□ -1.82
ITGB1-205ENST00000423113 SORL1Q92673 2214 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 USP17L23D6RBM5 183 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 ZNF561-AS1K7EIQ3 104 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 RNASE1P07998 156 aaKnown RBP3.69□□□□□ -1.82
ITGB1-205ENST00000423113 SHANK2-AS3Q9BTD1 123 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 NDUFA4L2Q9NRX3 87 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV4-30-2A0A087WSY4 118 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 A0A087WVE0 104 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 TRAV21A0A0B4J279 112 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 ZNF833PQ6ZTB9 187 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 ABCA4P78363 2273 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 TRAV23DV6A0A075B6W5 121 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 IGKV3D-20A0A0C4DH25 116 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 IGHG2P01859 326 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 ELANEP08246 267 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 FAM74A4Q5TZK3 123 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 DYNAPQ8N1N2 210 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 LINC01356Q8N9X3 169 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 THAP8Q8NA92 274 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
ITGB1-205ENST00000423113 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.68□□□□□ -1.825e-8■■■■□ 22.3
ITGB1-205ENST00000423113 PCNX1Q96RV3 2341 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 DNAH7Q8WXX0 4024 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 DAZ2Q13117 558 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 DAZ4Q86SG3 579 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 DAZ1Q9NQZ3 744 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 DAZ3Q9NR90 486 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 PKDREJQ9NTG1 2253 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 IGKV1D-37A0A075B6S9 117 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 TRAV12-2A0A075B6T6 113 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV3-66A0A0C4DH42 116 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 TRBV30A0A0K0K1B3 111 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 PRB3Q04118 309 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 MINOS1Q5TGZ0 78 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 LYPD1Q8N2G4 141 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 TMEM263Q8WUH6 116 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 RPL39LQ96EH5 51 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 MINOS1-NBL1R4GNA1 71 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 SMIM26A0A096LP01 95 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV3-49A0A0A0MS15 119 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV4-61A0A0C4DH41 118 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 B4DSR2 109 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 E7EUB6 86 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 IGLV2-11P01706 119 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 IGHV3-23P01764 117 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 HOXB4P17483 251 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 ZFP36P26651 326 aaKnown RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 FAM223AQ8IWN6 122 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 NEXN-AS1Q8NBZ9 246 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 RITA1Q96K30 269 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 C2orf48Q96LS8 159 aa3.68□□□□□ -1.82
ITGB1-205ENST00000423113 NSD1Q96L73 2696 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-205ENST00000423113 TET2Q6N021 2002 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 ARHGAP32A7KAX9 2087 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 I3L3M4 83 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 HOXD3P31249 432 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 C1orf229Q6ZS94 237 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TMEM167AQ8TBQ9 72 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 C9orf85Q96MD7 179 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 SLC50A1Q9BRV3 221 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 RNF223E7ERA6 249 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TIMM17BO60830 172 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 MSMBP08118 114 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 CXCL5P42830 114 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 RNF5Q99942 180 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 C11orf68Q9H3H3 251 aaKnown RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TPSG1Q9NRR2 321 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TMEM14CQ9P0S9 112 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 IGKV3-7A0A075B6H7 116 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 LY6G6DO95868 133 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 PPP1R17O96001 155 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 RPL39P62891 51 aaKnown RBP3.67□□□□□ -1.82
ITGB1-205ENST00000423113 MRGPRG-AS1Q2M3A8 158 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 FAM216BQ8N7L0 139 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TMEM190Q8WZ59 177 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 TOMM6Q96B49 74 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 BPESC1Q9GZL8 116 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 C16orf95Q9H693 158 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 NDUFA12Q9UI09 145 aa3.67□□□□□ -1.82
ITGB1-205ENST00000423113 ABCA12Q86UK0 2595 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms