RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 MDS2Q8NDY4 140 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 KLF14Q8TD94 323 aaPredicted RBP2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 EEF1AKMT3Q96AZ1 226 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 AMELXQ99217 191 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 RETNQ9HD89 108 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 ESM1Q9NQ30 184 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 DAZ1Q9NQZ3 744 aaKnown RBP2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 DAZ3Q9NR90 486 aaKnown RBP2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 ANAPC11Q9NYG5 84 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 XCL2Q9UBD3 114 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 EXPH5Q8NEV8 1989 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 PCDH15Q96QU1 1955 aa2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 SNRNP200O75643 2136 aaKnown RBP2.35□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV1OR21-1A0A087WYE8 117 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV5-51A0A0C4DH38 117 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 H0Y9J4 135 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 H3BTX0 84 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 H7BZZ5 65 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 I3L3M4 83 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 IGHV3-9P01782 118 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 BAALC-AS2P0C853 105 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 SAA4P35542 130 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 TSPEAR-AS2P59090 65 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 RBM3P98179 157 aaKnown RBP2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 NDPQ00604 133 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 WT1-ASQ06250 92 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 KLKP1Q107X0 134 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 ZNF833PQ6ZTB9 187 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 KRTAP11-1Q8IUC1 163 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 CLEC2BQ92478 149 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 IMMP1LQ96LU5 166 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 Q9UF83 564 aa2.34□□□□□ -2.03
SDCBPP3-201ENST00000419629 TRIOBPQ9H2D6 2365 aa2.34□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGHV1OR15-9A0A0B4J2B8 117 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGHV3-35A0A0C4DH35 117 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 SPTY2D1-AS1A0A0U1RR47 76 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGIPA6NJ69 53 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 M0R1W7 72 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 NDUFB3O43676 98 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 CCKP06307 115 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 GIG44P09565 113 aaPredicted RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 ZNF80P51504 273 aaPredicted RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 SNRPD3P62318 126 aaKnown RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 BLCAPP62952 87 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 NSUN5P1Q3KNT7 163 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 FP248Q71RG6 208 aaPredicted RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 FAM223AQ8IWN6 122 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 DYNLRB2Q8TF09 96 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 C11orf68Q9H3H3 251 aaKnown RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 LINC00574Q9H8X3 128 aa2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 SPTBN5Q9NRC6 3674 aaKnown RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 GOLGA4Q13439 2230 aaKnown RBP2.33□□□□□ -2.04
SDCBPP3-201ENST00000419629 LAMA2P24043 3122 aaKnown RBP2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 TRAV13-2A0A0B4J235 113 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGHV1-58A0A0C4DH39 117 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGKV3D-7A0A0C4DH55 119 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 IBA57-AS1B1ANH7 110 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 TRGV3P03979 118 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGKV1-16P04430 117 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 CGB3P0DN86 165 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 CGB7P0DN87 165 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 C17orf82Q86X59 251 aaPredicted RBP2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 MRPL36Q9P0J6 103 aaKnown RBP2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 LENEPQ9Y5L5 61 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 VCANP13611 3396 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 PRUNE2Q8WUY3 3088 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 PTPRBP23467 1997 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 MYOFQ9NZM1 2061 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 MYO9BQ13459 2157 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 SPAG17Q6Q759 2223 aa2.32□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGKV1D-17A0A075B6S4 117 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 TRAV12-3A0A0B4J271 114 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGHV1-18A0A0C4DH31 117 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGHV7-4-1A0A0J9YVY3 117 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 TRBV6-5A0A0K0K1A5 114 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 CCL21O00585 134 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 ERC2-IT1O76042 136 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGKV1-17P01599 117 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 MGPP08493 103 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 IGHV3-30-3P0DP02 117 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 CCL3P10147 92 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 DAD1P61803 113 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 ESRGQ1W209 222 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 MYO7BQ6PIF6 2116 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 Q8TAT8 98 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 CCL13Q99616 98 aa2.31□□□□□ -2.04
SDCBPP3-201ENST00000419629 UBL5Q9BZL1 73 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms