RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ANAPC16Q96DE5 110 aa4.26□□□□□ -1.73
USP54-202ENST00000413442 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
USP54-202ENST00000413442 IGKV2D-24A0A075B6R9 120 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 TRBV27A0A0K0K1C4 114 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 I3L3M4 83 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 VCYO14598 125 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
USP54-202ENST00000413442 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
USP54-202ENST00000413442 CFAP161Q6P656 301 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 UQCC3Q6UW78 93 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 ENHOQ6UWT2 76 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 GATD1Q8NB37 220 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 Q9HAA7 133 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 ST20Q9HBF5 79 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 V9GYV3 84 aa4.25□□□□□ -1.73
USP54-202ENST00000413442 PKD1P98161 4303 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 HECTD4Q9Y4D8 3996 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 TRBV24-1A0A075B6N3 115 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 SDHAF1A6NFY7 115 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 PHOX2AO14813 284 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 MT-ND4LP03901 98 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 RAB4AP20338 218 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 PMCHP20382 165 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 AMTP48728 403 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 POLR2KP53803 58 aaKnown RBP4.24□□□□□ -1.73
USP54-202ENST00000413442 KRTAP10-2P60368 255 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 RBX1P62877 108 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 ADIRFQ15847 76 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 CLLU1Q5K131 121 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 ATP5L2Q7Z4Y8 100 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 Q8N1X5 172 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 BTF3L4Q96K17 158 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 IMMP2LQ96T52 175 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 KIR2DL4Q99706 377 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 C20orf78Q9BR46 151 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 PKIGQ9Y2B9 76 aa4.24□□□□□ -1.73
USP54-202ENST00000413442 CSDC2Q9Y534 153 aaKnown RBP4.24□□□□□ -1.73
USP54-202ENST00000413442 APCSP02743 223 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 G0S2P27469 103 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 REG3AQ06141 175 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 MPV17L2Q567V2 206 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 FAM104BQ5XKR9 115 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
USP54-202ENST00000413442 LINC00269Q8N2A0 174 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 TMEM101Q96IK0 257 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 LAMTOR2Q9Y2Q5 125 aa4.23□□□□□ -1.73
USP54-202ENST00000413442 DNAH2Q9P225 4427 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
USP54-202ENST00000413442 PRSS47A8MTI9 375 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 FAM229AH3BQW9 127 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 K7EMI3 77 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 ESDP10768 282 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 AMMECR1LQ6DCA0 310 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 TIMM21Q9BVV7 248 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
USP54-202ENST00000413442 TRAV9-1A0A075B6T8 112 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 LINC01549A6NIU2 74 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 C9JQL5 133 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 CKS2P33552 79 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 SUMO2P61956 95 aaKnown RBP4.21□□□□□ -1.74
USP54-202ENST00000413442 HBBP68871 147 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 GAGE6Q13070 117 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 COX19Q49B96 90 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 RNF185Q96GF1 192 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 CTDSP1Q9GZU7 261 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 AP5S1Q9NUS5 200 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 TMEM242Q9NWH2 141 aa4.21□□□□□ -1.74
USP54-202ENST00000413442 C7orf77A4D0Y5 90 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 C1orf196B1AJZ1 125 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 FGF6P10767 208 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 FCER1GP30273 86 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 XGP55808 180 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 SRSF3P84103 164 aaKnown RBP4.2□□□□□ -1.74
USP54-202ENST00000413442 SS18Q15532 418 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 Q6ZSA8 131 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 AMN1Q8IY45 258 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 C9orf163Q8N9P6 203 aa4.2□□□□□ -1.74
USP54-202ENST00000413442 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 TRAV26-2A0A0B4J265 109 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 A0A1B0GXF2 115 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 EPM2AB3EWF7 344 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 USP17L23D6RBM5 183 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 F8WDY8 70 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 NPSP0C0P6 89 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 RAB5AP20339 215 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 CAMPP49913 170 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
USP54-202ENST00000413442 MRPL51Q4U2R6 128 aaKnown RBP4.19□□□□□ -1.74
USP54-202ENST00000413442 RNASEKQ6P5S7 137 aaKnown RBP4.19□□□□□ -1.74
USP54-202ENST00000413442 KRTAP26-1Q6PEX3 210 aa4.19□□□□□ -1.74
USP54-202ENST00000413442 ORMDL3Q8N138 153 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms