RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
PCDHA13-202ENST00000409494 H0YGX0 51 aa12.56□□□□□ -0.4
PCDHA13-202ENST00000409494 MYO9AB2RTY4 2548 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 E9PLD3 99 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 AVPP01185 164 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 CITED1Q99966 193 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 CEP295Q9C0D2 2601 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 KRTAP10-9P60411 292 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 Q6ZTI0 123 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 EML5Q05BV3 1969 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 A0A1W2PPR1 153 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 HIST1H4AP62805 103 aaKnown RBP12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 RPL39P62891 51 aaKnown RBP12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 KLK12Q9UKR0 248 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 WFDC2Q14508 124 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 SPAG11BQ08648 103 aa12.52□□□□□ -0.4
PCDHA13-202ENST00000409494 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 TRAV10A0A0B4J240 114 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 ETDCA0A1B0GVM5 59 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 RS1O15537 224 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 CENPFP49454 3210 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 A4D1N5 150 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 KLLNB2CW77 178 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 DEFB4AO15263 64 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 TIRAPP58753 221 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 CRIP1P50238 77 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 IGHV1-58A0A0C4DH39 117 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 UBL5Q9BZL1 73 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 EXPH5Q8NEV8 1989 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 DSCR8Q96T75 97 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 RPL18AQ02543 176 aaKnown RBP12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 MUSTN1Q8IVN3 82 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 SORL1Q92673 2214 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 TEN1Q86WV5 123 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 TANC2Q9HCD6 1990 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 LINC00310P59036 64 aa12.46□□□□□ -0.41
PCDHA13-202ENST00000409494 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.42
PCDHA13-202ENST00000409494 G3V4G9 280 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 FAM110AQ9BQ89 295 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 ORMDL1Q9P0S3 153 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 U3KQK5 164 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 Q6ZS46 218 aa12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 OPRPNQ99935 248 aaPredicted RBP12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 SPTBN4Q9H254 2564 aa12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 IGLV1-51P01701 117 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 M0QY20 66 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 REG3AQ06141 175 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 RNF183Q96D59 192 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 C9orf153Q5TBE3 101 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 NEXN-AS1Q8NBZ9 246 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 TRBV6-8A0A0A6YYG3 113 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 FOXI1Q12951 378 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 LINC00482Q8N8I6 264 aa12.41□□□□□ -0.42
PCDHA13-202ENST00000409494 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
PCDHA13-202ENST00000409494 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
PCDHA13-202ENST00000409494 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
PCDHA13-202ENST00000409494 Q6ZUT4 128 aa12.4□□□□□ -0.42
PCDHA13-202ENST00000409494 ARHGAP32A7KAX9 2087 aa12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 BAALC-AS2P0C853 105 aa12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 CRYGDP07320 174 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 MIAQ16674 131 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 CHD8Q9HCK8 2581 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 ZFYVE26Q68DK2 2539 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 DSCAML1Q8TD84 2053 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
PCDHA13-202ENST00000409494 LELP1Q5T871 98 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms