RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 COX7BP24311 80 aa18.76■□□□□ 0.59
SPIRE1-202ENST00000409402 CSPG4Q6UVK1 2322 aa18.76■□□□□ 0.59
SPIRE1-202ENST00000409402 NPSP0C0P6 89 aa18.75■□□□□ 0.59
SPIRE1-202ENST00000409402 JMJD7-PLA2G4BH0Y9G9 81 aa18.75■□□□□ 0.59
SPIRE1-202ENST00000409402 IGLC6P0CF74 106 aa18.75■□□□□ 0.59
SPIRE1-202ENST00000409402 TNRC6AQ8NDV7 1962 aaKnown RBP18.75■□□□□ 0.59
SPIRE1-202ENST00000409402 DSCAMO60469 2012 aa18.75■□□□□ 0.59
SPIRE1-202ENST00000409402 TTTY13Q9BZ97 58 aa18.74■□□□□ 0.59
SPIRE1-202ENST00000409402 TNCP24821 2201 aa18.74■□□□□ 0.59
SPIRE1-202ENST00000409402 PCDH15Q96QU1 1955 aa18.74■□□□□ 0.59
SPIRE1-202ENST00000409402 NFE4Q86UQ8 179 aa18.74■□□□□ 0.59
SPIRE1-202ENST00000409402 LINC01620Q4KN68 170 aa18.73■□□□□ 0.59
SPIRE1-202ENST00000409402 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
SPIRE1-202ENST00000409402 LINC00322Q6ZN03 302 aaPredicted RBP18.72■□□□□ 0.59
SPIRE1-202ENST00000409402 Q8N6K4 173 aa18.72■□□□□ 0.59
SPIRE1-202ENST00000409402 NEXN-AS1Q8NBZ9 246 aa18.72■□□□□ 0.59
SPIRE1-202ENST00000409402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.72■□□□□ 0.59
SPIRE1-202ENST00000409402 LINC00467Q9BRT7 94 aa18.72■□□□□ 0.59
SPIRE1-202ENST00000409402 CACNA1AO00555 2505 aa18.71■□□□□ 0.59
SPIRE1-202ENST00000409402 CFAP126Q5VTH2 177 aa18.71■□□□□ 0.59
SPIRE1-202ENST00000409402 FRMD6-AS1P0C7T7 363 aa18.71■□□□□ 0.59
SPIRE1-202ENST00000409402 HIST2H2BDQ6DRA6 164 aa18.71■□□□□ 0.59
SPIRE1-202ENST00000409402 TRBV6-4A0A1B0GX49 114 aa18.71■□□□□ 0.59
SPIRE1-202ENST00000409402 A0A1B0GXF2 115 aa18.7■□□□□ 0.58
SPIRE1-202ENST00000409402 IGLV2-8P01709 118 aa18.7■□□□□ 0.58
SPIRE1-202ENST00000409402 FXYD2P54710 66 aa18.7■□□□□ 0.58
SPIRE1-202ENST00000409402 MP68P56378 58 aa18.69■□□□□ 0.58
SPIRE1-202ENST00000409402 RBM3P98179 157 aaKnown RBP18.68■□□□□ 0.58
SPIRE1-202ENST00000409402 A0A0B4J2C4 111 aa18.68■□□□□ 0.58
SPIRE1-202ENST00000409402 GDF5OSQ5U4N7 250 aa18.68■□□□□ 0.58
SPIRE1-202ENST00000409402 HIGD2AQ9BW72 106 aa18.68■□□□□ 0.58
SPIRE1-202ENST00000409402 TMEM256-PLSCR3K7ERE1 68 aa18.68■□□□□ 0.58
SPIRE1-202ENST00000409402 TRBV6-8A0A0A6YYG3 113 aa18.67■□□□□ 0.58
SPIRE1-202ENST00000409402 A0A1B0GX51 115 aa18.67■□□□□ 0.58
SPIRE1-202ENST00000409402 CHKB-CPT1BH3BT56 60 aa18.67■□□□□ 0.58
SPIRE1-202ENST00000409402 MLST8Q9BVC4 326 aa18.67■□□□□ 0.58
SPIRE1-202ENST00000409402 CDSNQ15517 529 aa18.67■□□□□ 0.58
SPIRE1-202ENST00000409402 MIAQ16674 131 aa18.67■□□□□ 0.58
SPIRE1-202ENST00000409402 MED12LQ86YW9 2145 aa18.66■□□□□ 0.58
SPIRE1-202ENST00000409402 NCOA6Q14686 2063 aaPredicted RBP18.66■□□□□ 0.58
SPIRE1-202ENST00000409402 CEP192Q8TEP8 1941 aa18.66■□□□□ 0.58
SPIRE1-202ENST00000409402 ZNF295-AS1Q8N0V1 137 aa18.65■□□□□ 0.58
SPIRE1-202ENST00000409402 A0A087WZ39 114 aa18.65■□□□□ 0.58
SPIRE1-202ENST00000409402 CDPF1Q6NVV7 123 aa18.65■□□□□ 0.58
SPIRE1-202ENST00000409402 NUP210LQ5VU65 1888 aa18.65■□□□□ 0.58
SPIRE1-202ENST00000409402 CLEC2BQ92478 149 aa18.65■□□□□ 0.58
SPIRE1-202ENST00000409402 KIR2DL5BQ8NHK3 375 aa18.64■□□□□ 0.58
SPIRE1-202ENST00000409402 C18orf65Q6ZTR6 163 aa18.64■□□□□ 0.57
SPIRE1-202ENST00000409402 IGLV1-40P01703 118 aa18.63■□□□□ 0.57
SPIRE1-202ENST00000409402 TDRG1Q3Y452 100 aa18.63■□□□□ 0.57
SPIRE1-202ENST00000409402 MBD6Q96DN6 1003 aa18.63■□□□□ 0.57
SPIRE1-202ENST00000409402 SPANXCQ9NY87 97 aa18.63■□□□□ 0.57
SPIRE1-202ENST00000409402 MUC22E2RYF6 1773 aaPredicted RBP18.63■□□□□ 0.57
SPIRE1-202ENST00000409402 BBC3Q96PG8 261 aaPredicted RBP18.63■□□□□ 0.57
SPIRE1-202ENST00000409402 LRCOL1A6NCL2 159 aa18.62■□□□□ 0.57
SPIRE1-202ENST00000409402 C10orf142B7Z368 130 aa18.62■□□□□ 0.57
SPIRE1-202ENST00000409402 FAM19A1Q7Z5A9 133 aa18.62■□□□□ 0.57
SPIRE1-202ENST00000409402 H0Y9J4 135 aa18.61■□□□□ 0.57
SPIRE1-202ENST00000409402 SONP18583 2426 aaKnown RBP18.61■□□□□ 0.57
SPIRE1-202ENST00000409402 NDUFA7O95182 113 aa18.61■□□□□ 0.57
SPIRE1-202ENST00000409402 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.6■□□□□ 0.57
SPIRE1-202ENST00000409402 IGKV3D-7A0A0C4DH55 119 aa18.6■□□□□ 0.57
SPIRE1-202ENST00000409402 M0QY20 66 aa18.6■□□□□ 0.57
SPIRE1-202ENST00000409402 PDE6GP18545 87 aa18.6■□□□□ 0.57
SPIRE1-202ENST00000409402 A0A0J9YXY3 114 aa18.6■□□□□ 0.57
SPIRE1-202ENST00000409402 TRBV10-2A0A0K0K1G8 114 aa18.6■□□□□ 0.57
SPIRE1-202ENST00000409402 ATRXP46100 2492 aa18.59■□□□□ 0.57
SPIRE1-202ENST00000409402 Q6ZS46 218 aa18.59■□□□□ 0.57
SPIRE1-202ENST00000409402 CDKN2A-AS1Q9UH64 79 aa18.58■□□□□ 0.57
SPIRE1-202ENST00000409402 TEN1Q86WV5 123 aa18.58■□□□□ 0.56
SPIRE1-202ENST00000409402 C7orf33Q8WU49 177 aa18.58■□□□□ 0.56
SPIRE1-202ENST00000409402 WFDC10AQ9H1F0 79 aa18.58■□□□□ 0.56
SPIRE1-202ENST00000409402 TNRC6BQ9UPQ9 1833 aaKnown RBP18.57■□□□□ 0.56
SPIRE1-202ENST00000409402 KPRPQ5T749 579 aaPredicted RBP18.57■□□□□ 0.56
SPIRE1-202ENST00000409402 IGLV4-3A0A075B6K6 122 aa18.57■□□□□ 0.56
SPIRE1-202ENST00000409402 SMR3AQ99954 134 aa18.56■□□□□ 0.56
SPIRE1-202ENST00000409402 H3BT86 120 aa18.56■□□□□ 0.56
SPIRE1-202ENST00000409402 SYCNQ0VAF6 134 aa18.56■□□□□ 0.56
SPIRE1-202ENST00000409402 IGLV2-18A0A075B6J9 118 aa18.56■□□□□ 0.56
SPIRE1-202ENST00000409402 KRTAP10-9P60411 292 aa18.56■□□□□ 0.56
SPIRE1-202ENST00000409402 SPATA12Q7Z6I5 190 aa18.56■□□□□ 0.56
SPIRE1-202ENST00000409402 FAM19A5Q7Z5A7 132 aaPredicted RBP18.54■□□□□ 0.56
SPIRE1-202ENST00000409402 TMEM258P61165 79 aa18.54■□□□□ 0.56
SPIRE1-202ENST00000409402 PROK1P58294 105 aa18.54■□□□□ 0.56
SPIRE1-202ENST00000409402 AVPP01185 164 aa18.54■□□□□ 0.56
SPIRE1-202ENST00000409402 CRIP1P50238 77 aa18.53■□□□□ 0.56
SPIRE1-202ENST00000409402 IBA57-AS1B1ANH7 110 aa18.53■□□□□ 0.56
SPIRE1-202ENST00000409402 Q8N976 141 aa18.53■□□□□ 0.56
SPIRE1-202ENST00000409402 M0R2N4 97 aa18.52■□□□□ 0.55
SPIRE1-202ENST00000409402 LY6G6CO95867 125 aa18.52■□□□□ 0.55
SPIRE1-202ENST00000409402 OXLD1Q5BKU9 147 aa18.52■□□□□ 0.55
SPIRE1-202ENST00000409402 NAV2Q8IVL1 2488 aa18.51■□□□□ 0.55
SPIRE1-202ENST00000409402 TMEM223A0PJW6 202 aa18.5■□□□□ 0.55
SPIRE1-202ENST00000409402 ZNF22P17026 224 aaPredicted RBP18.5■□□□□ 0.55
SPIRE1-202ENST00000409402 LELP1Q5T871 98 aa18.5■□□□□ 0.55
SPIRE1-202ENST00000409402 RBX1P62877 108 aa18.5■□□□□ 0.55
SPIRE1-202ENST00000409402 WFDC9Q8NEX5 89 aa18.49■□□□□ 0.55
SPIRE1-202ENST00000409402 PRB2P02812 416 aaPredicted RBP18.49■□□□□ 0.55
SPIRE1-202ENST00000409402 C14orf132Q9NPU4 83 aa18.49■□□□□ 0.55
SPIRE1-202ENST00000409402 IGKV2D-26A0A0A0MRZ7 120 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms