RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 BEAN1Q3B7T3 259 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 TMEM61Q8N0U2 210 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 C4orf3Q8WVX3 66 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 VSIG2Q96IQ7 327 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 NDUFA12Q9UI09 145 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 DOPEY1Q5JWR5 2465 aa7.81□□□□□ -1.16
CLIP4-204ENST00000404424 Q1RN00 199 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 DEFB136Q30KP8 78 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 CEMP1Q6PRD7 247 aaPredicted RBP7.8□□□□□ -1.16
CLIP4-204ENST00000404424 C18orf65Q6ZTR6 163 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 C11orf72Q8NBR9 251 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 RNF183Q96D59 192 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 LINC01600Q96MT4 127 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 LINC01587Q99440 93 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 MAP6D1Q9H9H5 199 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 SORL1Q92673 2214 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 TRAV8-3A0A0A6YYJ7 113 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 Q6ZSN1 163 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 ITPR1Q14643 2758 aa7.8□□□□□ -1.16
CLIP4-204ENST00000404424 C9JAW5 83 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 RS1O15537 224 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 INSP01308 110 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 DYNLRB2Q8TF09 96 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 CLUHP3Q96NS8 147 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 H7C2G1 150 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 TIMM17BO60830 172 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 FHL3Q13643 280 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 MIAQ16674 131 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 Q6ZUT4 128 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 YAE1D1Q9NRH1 226 aa7.79□□□□□ -1.16
CLIP4-204ENST00000404424 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
CLIP4-204ENST00000404424 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
CLIP4-204ENST00000404424 ADARB2-AS1A8MUL3 147 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 PRM2P04554 102 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 PRSS2P07478 247 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 TIRAPP58753 221 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 ZFAND6Q6FIF0 208 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 GEMIN7Q9H840 131 aaKnown RBP7.78□□□□□ -1.16
CLIP4-204ENST00000404424 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 RNASE13Q5GAN3 156 aaKnown RBP7.78□□□□□ -1.16
CLIP4-204ENST00000404424 Q9UF83 564 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 NACAE9PAV3 2078 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 COL12A1Q99715 3063 aa7.78□□□□□ -1.16
CLIP4-204ENST00000404424 IGLV5-45A0A087WSX0 123 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 IFITM1P13164 125 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 MT-ATP8P03928 68 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 COX6CP09669 75 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 XGP55808 180 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 CKS1BP61024 79 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 PKD1L2Q7Z442 2459 aa7.77□□□□□ -1.17
CLIP4-204ENST00000404424 PRRC2AP48634 2157 aaKnown RBP7.77□□□□□ -1.17
CLIP4-204ENST00000404424 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
CLIP4-204ENST00000404424 TRIAP1O43715 76 aa7.76□□□□□ -1.17
CLIP4-204ENST00000404424 ICOSQ9Y6W8 199 aa7.76□□□□□ -1.17
CLIP4-204ENST00000404424 TRAV25A0A0B4J276 109 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 KHDC1LQ5JSQ8 128 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 DGAT2L7PQ6IED9 249 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 LRRC75A-AS1Q8N1F1 130 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 NDUFA1O15239 70 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 RPL13AP40429 203 aaKnown RBP7.75□□□□□ -1.17
CLIP4-204ENST00000404424 CDKN2A-AS1Q9UH64 79 aa7.75□□□□□ -1.17
CLIP4-204ENST00000404424 HERVK_113P63121 156 aa7.74□□□□□ -1.17
CLIP4-204ENST00000404424 CIRBPQ14011 172 aaKnown RBP7.74□□□□□ -1.17
CLIP4-204ENST00000404424 FAM19A3Q7Z5A8 133 aa7.74□□□□□ -1.17
CLIP4-204ENST00000404424 A8MZ25 164 aa7.74□□□□□ -1.17
CLIP4-204ENST00000404424 DEFB113Q30KQ7 82 aa7.74□□□□□ -1.17
CLIP4-204ENST00000404424 TMEM86BQ8N661 226 aa7.74□□□□□ -1.17
CLIP4-204ENST00000404424 TRBV10-1A0A0K0K1A3 114 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 STHQ8IWL8 128 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 IL17DQ8TAD2 202 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 NTN5Q8WTR8 489 aaPredicted RBP7.73□□□□□ -1.17
CLIP4-204ENST00000404424 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 CSDC2Q9Y534 153 aaKnown RBP7.73□□□□□ -1.17
CLIP4-204ENST00000404424 CR1P17927 2039 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 CREBBPQ92793 2442 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 H3BT86 120 aa7.73□□□□□ -1.17
CLIP4-204ENST00000404424 IGLV5-39A0A0G2JS06 123 aa7.72□□□□□ -1.17
CLIP4-204ENST00000404424 ODF3L2Q3SX64 289 aa7.72□□□□□ -1.17
CLIP4-204ENST00000404424 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
CLIP4-204ENST00000404424 XCL2Q9UBD3 114 aa7.72□□□□□ -1.17
CLIP4-204ENST00000404424 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
CLIP4-204ENST00000404424 RPL36AP83881 106 aaKnown RBP7.72□□□□□ -1.17
CLIP4-204ENST00000404424 DAZ2Q13117 558 aaKnown RBP7.72□□□□□ -1.17
CLIP4-204ENST00000404424 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
CLIP4-204ENST00000404424 C1orf158Q8N1D5 194 aa7.72□□□□□ -1.17
CLIP4-204ENST00000404424 RPL36ALQ969Q0 106 aaKnown RBP7.72□□□□□ -1.17
CLIP4-204ENST00000404424 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
CLIP4-204ENST00000404424 USP9XQ93008 2570 aaPredicted RBP7.72□□□□□ -1.17
CLIP4-204ENST00000404424 LST1O00453 97 aa7.71□□□□□ -1.17
CLIP4-204ENST00000404424 NPC2P61916 151 aa7.71□□□□□ -1.17
CLIP4-204ENST00000404424 C2orf82Q6UX34 121 aa7.71□□□□□ -1.17
CLIP4-204ENST00000404424 UBE2WQ96B02 151 aa7.71□□□□□ -1.17
CLIP4-204ENST00000404424 TRGV1A0A0A0MS02 117 aa7.71□□□□□ -1.18
CLIP4-204ENST00000404424 LINC00242Q5T6M2 205 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms