RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 VPREB3Q9UKI3 123 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
PTPRA-205ENST00000399903 LOC107984640A0A0U1RRK4 108 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 OOSP1A8MZH6 123 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 TIMM17AQ99595 171 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
PTPRA-205ENST00000399903 ZNF625Q96I27 306 aaPredicted RBP12.71□□□□□ -0.37
PTPRA-205ENST00000399903 LINC00694P0DN24 101 aa12.71□□□□□ -0.38
PTPRA-205ENST00000399903 IGHV3-30-3P0DP02 117 aa12.71□□□□□ -0.38
PTPRA-205ENST00000399903 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.38
PTPRA-205ENST00000399903 Q6Q795 121 aa12.7□□□□□ -0.38
PTPRA-205ENST00000399903 CD28P10747 220 aa12.7□□□□□ -0.38
PTPRA-205ENST00000399903 TMEM101Q96IK0 257 aa12.7□□□□□ -0.38
PTPRA-205ENST00000399903 CCL19Q99731 98 aa12.7□□□□□ -0.38
PTPRA-205ENST00000399903 ATP5J2P56134 94 aa12.7□□□□□ -0.38
PTPRA-205ENST00000399903 NDUFA12Q9UI09 145 aa12.69□□□□□ -0.38
PTPRA-205ENST00000399903 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
PTPRA-205ENST00000399903 OVOL1O14753 267 aa12.69□□□□□ -0.38
PTPRA-205ENST00000399903 IGHV4-38-2P0DP08 117 aa12.69□□□□□ -0.38
PTPRA-205ENST00000399903 Q8N6K4 173 aa12.69□□□□□ -0.38
PTPRA-205ENST00000399903 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
PTPRA-205ENST00000399903 KLK9Q9UKQ9 250 aa12.69□□□□□ -0.38
PTPRA-205ENST00000399903 IGHV4-30-2A0A087WSY4 118 aa12.68□□□□□ -0.38
PTPRA-205ENST00000399903 NPFFO15130 113 aa12.68□□□□□ -0.38
PTPRA-205ENST00000399903 TRBV30A0A0K0K1B3 111 aa12.68□□□□□ -0.38
PTPRA-205ENST00000399903 LINC00315P59091 139 aa12.68□□□□□ -0.38
PTPRA-205ENST00000399903 I3L3M4 83 aa12.68□□□□□ -0.38
PTPRA-205ENST00000399903 NBPF19A0A087WUL8 3843 aa12.67□□□□□ -0.38
PTPRA-205ENST00000399903 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
PTPRA-205ENST00000399903 TRAV41A0A0B4J266 112 aa12.67□□□□□ -0.38
PTPRA-205ENST00000399903 MINOS1Q5TGZ0 78 aa12.67□□□□□ -0.38
PTPRA-205ENST00000399903 MINOS1-NBL1R4GNA1 71 aa12.67□□□□□ -0.38
PTPRA-205ENST00000399903 TEX15Q9BXT5 2789 aa12.66□□□□□ -0.38
PTPRA-205ENST00000399903 MXRA5Q9NR99 2828 aa12.66□□□□□ -0.38
PTPRA-205ENST00000399903 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
PTPRA-205ENST00000399903 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
PTPRA-205ENST00000399903 LENEPQ9Y5L5 61 aa12.65□□□□□ -0.38
PTPRA-205ENST00000399903 EDN2P20800 178 aa12.65□□□□□ -0.38
PTPRA-205ENST00000399903 LINC01587Q99440 93 aa12.65□□□□□ -0.38
PTPRA-205ENST00000399903 EDA2RQ9HAV5 297 aa12.64□□□□□ -0.39
PTPRA-205ENST00000399903 IGLV4-3A0A075B6K6 122 aa12.64□□□□□ -0.39
PTPRA-205ENST00000399903 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
PTPRA-205ENST00000399903 A0A087WW49 117 aa12.64□□□□□ -0.39
PTPRA-205ENST00000399903 PF4V1P10720 104 aa12.64□□□□□ -0.39
PTPRA-205ENST00000399903 RHPN1-AS1Q9BWJ2 59 aa12.64□□□□□ -0.39
PTPRA-205ENST00000399903 H3BT86 120 aa12.63□□□□□ -0.39
PTPRA-205ENST00000399903 BBC3Q96PG8 261 aaPredicted RBP12.63□□□□□ -0.39
PTPRA-205ENST00000399903 KNCNA6PVL3 124 aa12.63□□□□□ -0.39
PTPRA-205ENST00000399903 TRBV27A0A0K0K1C4 114 aa12.62□□□□□ -0.39
PTPRA-205ENST00000399903 EBI3Q14213 229 aa12.62□□□□□ -0.39
PTPRA-205ENST00000399903 C20orf203Q8NBC4 194 aa12.62□□□□□ -0.39
PTPRA-205ENST00000399903 TMEM126AQ9H061 195 aa12.62□□□□□ -0.39
PTPRA-205ENST00000399903 ACANP16112 2415 aa12.62□□□□□ -0.39
PTPRA-205ENST00000399903 ZNF469Q96JG9 3925 aaPredicted RBP12.61□□□□□ -0.39
PTPRA-205ENST00000399903 AVPP01185 164 aa12.61□□□□□ -0.39
PTPRA-205ENST00000399903 PIMREGQ9BSJ6 248 aa12.61□□□□□ -0.39
PTPRA-205ENST00000399903 BLCAPP62952 87 aa12.61□□□□□ -0.39
PTPRA-205ENST00000399903 HERVK_113P63121 156 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 U3KQE9 123 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 H3BUX3 64 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 LST1O00453 97 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 M0QY20 66 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 PROK1P58294 105 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
PTPRA-205ENST00000399903 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
PTPRA-205ENST00000399903 GAGE2AQ6NT46 116 aa12.59□□□□□ -0.39
PTPRA-205ENST00000399903 NOTCH2Q04721 2471 aa12.59□□□□□ -0.39
PTPRA-205ENST00000399903 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
PTPRA-205ENST00000399903 IGHV3-38A0A0C4DH36 116 aa12.59□□□□□ -0.39
PTPRA-205ENST00000399903 IGHV1-69P01742 117 aa12.58□□□□□ -0.4
PTPRA-205ENST00000399903 C10orf105Q8TEF2 133 aa12.58□□□□□ -0.4
PTPRA-205ENST00000399903 MTORP42345 2549 aa12.58□□□□□ -0.4
PTPRA-205ENST00000399903 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-205ENST00000399903 IGKV2-29A2NJV5 120 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-205ENST00000399903 RHOHQ15669 191 aa12.58□□□□□ -0.4
PTPRA-205ENST00000399903 NF1P21359 2839 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 NXPH4O95158 308 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 NDUFA7O95182 113 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 MED14OSP0DP75 135 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 MIAQ16674 131 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 LITAFQ99732 161 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 PRM2P04554 102 aa12.57□□□□□ -0.4
PTPRA-205ENST00000399903 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
PTPRA-205ENST00000399903 C3orf22Q8N5N4 141 aa12.56□□□□□ -0.4
PTPRA-205ENST00000399903 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
PTPRA-205ENST00000399903 TRAV13-1A0A0B4J241 112 aa12.55□□□□□ -0.4
PTPRA-205ENST00000399903 IGHV1-58A0A0C4DH39 117 aa12.55□□□□□ -0.4
PTPRA-205ENST00000399903 Q9UF83 564 aa12.55□□□□□ -0.4
PTPRA-205ENST00000399903 CSDC2Q9Y534 153 aaKnown RBP12.55□□□□□ -0.4
PTPRA-205ENST00000399903 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
PTPRA-205ENST00000399903 DAZ4Q86SG3 579 aaKnown RBP12.55□□□□□ -0.4
PTPRA-205ENST00000399903 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
PTPRA-205ENST00000399903 DAZ3Q9NR90 486 aaKnown RBP12.55□□□□□ -0.4
PTPRA-205ENST00000399903 SOCS3O14543 225 aa12.54□□□□□ -0.4
PTPRA-205ENST00000399903 NSUN5P1Q3KNT7 163 aa12.54□□□□□ -0.4
PTPRA-205ENST00000399903 SPANXA1Q9NS26 97 aa12.54□□□□□ -0.4
PTPRA-205ENST00000399903 TRBV7-7A0A0K0K1E9 115 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms