RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 H7C423 109 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 COX6CP09669 75 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 ICOSQ9Y6W8 199 aa7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 SETD2Q9BYW2 2564 aaPredicted RBP7.31□□□□□ -1.24
PTCHD4-202ENST00000398738 IGLV4-3A0A075B6K6 122 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 M0QY20 66 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 SOCS3O14543 225 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 A0A0B4J2C4 111 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 TRBV27A0A0K0K1C4 114 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
PTCHD4-202ENST00000398738 LGALS9O00182 355 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 RPL13AP40429 203 aaKnown RBP7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 IGKV2-29A2NJV5 120 aaPredicted RBP7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 NDUFA4O00483 81 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 RS1O15537 224 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 LINC00482Q8N8I6 264 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 MOB4Q9Y3A3 225 aa7.29□□□□□ -1.24
PTCHD4-202ENST00000398738 MYO9AB2RTY4 2548 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 TRGV11A0A075B6L2 103 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 H3BUX3 64 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 I3L3M4 83 aa7.28□□□□□ -1.24
PTCHD4-202ENST00000398738 PIEZO1Q92508 2521 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 IGHV3-16A0A0C4DH30 117 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 FAM223BA6NKX1 122 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 C10orf99Q6UWK7 81 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 FAM223AQ8IWN6 122 aa7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 DAZ1Q9NQZ3 744 aaKnown RBP7.27□□□□□ -1.24
PTCHD4-202ENST00000398738 FAM236AA0A1B0GUQ0 79 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 FAM236BA0A1B0GV22 79 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 ID1P41134 155 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 KLLNB2CW77 178 aa7.27□□□□□ -1.25
PTCHD4-202ENST00000398738 CENPEQ02224 2701 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 MED14OSP0DP75 135 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 C11orf71Q6IPW1 123 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 POLQO75417 2590 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 USP9XQ93008 2570 aaPredicted RBP7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV4-38-2P0DP08 117 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 ADORA2A-AS1P86434 159 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 POM121L12Q8N7R1 296 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
PTCHD4-202ENST00000398738 SYNJ2BPP57105 145 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 FAM19A4Q96LR4 140 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 PTPN13Q12923 2485 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 SPTBN4Q9H254 2564 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV1OR15-1A0A075B7D0 117 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 NXPH4O95158 308 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 LMO4P61968 165 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 TLN2Q9Y4G6 2542 aa7.25□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV1-69P01742 117 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 RHOHQ15669 191 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 DGAT2L7PQ6IED9 249 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 LITAFQ99732 161 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 CELSR2Q9HCU4 2923 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 NSUN5P1Q3KNT7 163 aa7.24□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 A0A1W2PRX2 142 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 HOXD3P31249 432 aaPredicted RBP7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 HIST2H2BDQ6DRA6 164 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 DCANP1Q8TF63 244 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 KLK5Q9Y337 293 aaPredicted RBP7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 SNRPD3P62318 126 aaKnown RBP7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 MIAQ16674 131 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 TMEM61Q8N0U2 210 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
PTCHD4-202ENST00000398738 NDUFA7O95182 113 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 MRPL23Q16540 153 aaKnown RBP7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 LST1O00453 97 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 Q6ZSN1 163 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 C9orf85Q96MD7 179 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 IGHV3OR16-12A0A075B7B8 117 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 TMEM101Q96IK0 257 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 Q9H8V8 135 aa7.22□□□□□ -1.25
PTCHD4-202ENST00000398738 JMJD1CQ15652 2540 aa7.21□□□□□ -1.25
PTCHD4-202ENST00000398738 SONP18583 2426 aaKnown RBP7.21□□□□□ -1.25
PTCHD4-202ENST00000398738 TRAV13-1A0A0B4J241 112 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 H3BT86 120 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 APRG1Q8IVJ8 170 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 USMG5Q96IX5 58 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 Q9HAA7 133 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 ZANQ9Y493 2812 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 A0A0J9YX75 114 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 Q8N2B8 174 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 FAM110AQ9BQ89 295 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 LINC00467Q9BRT7 94 aa7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.26
PTCHD4-202ENST00000398738 ABCA2Q9BZC7 2435 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 LOC107984640A0A0U1RRK4 108 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 GYPEP15421 78 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 KLRB1Q12918 225 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 GAGE2AQ6NT46 116 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms