RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 DNAJC30Q96LL9 226 aa13.2□□□□□ -0.3
MBD1-208ENST00000398493 IGHV4-30-4P0DP06 118 aa13.2□□□□□ -0.3
MBD1-208ENST00000398493 HSD52Q0P140 79 aa13.2□□□□□ -0.3
MBD1-208ENST00000398493 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
MBD1-208ENST00000398493 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
MBD1-208ENST00000398493 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
MBD1-208ENST00000398493 IL17DQ8TAD2 202 aa13.19□□□□□ -0.3
MBD1-208ENST00000398493 HIGD1BQ9P298 99 aa13.19□□□□□ -0.3
MBD1-208ENST00000398493 HUWE1Q7Z6Z7 4374 aaKnown RBP13.19□□□□□ -0.3
MBD1-208ENST00000398493 IGHV3-53P01767 116 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 NMUP48645 174 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 OR4C5Q8NGB2 326 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 TRGV1A0A0A0MS02 117 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 A6NDN8 102 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 IGIPA6NJ69 53 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 TSHBP01222 138 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
MBD1-208ENST00000398493 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 TP73-AS1Q9UF72 201 aa13.18□□□□□ -0.3
MBD1-208ENST00000398493 PRSS29PA6NIE9 313 aa13.17□□□□□ -0.3
MBD1-208ENST00000398493 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
MBD1-208ENST00000398493 NPSP0C0P6 89 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 DAZ2Q13117 558 aaKnown RBP13.16□□□□□ -0.3
MBD1-208ENST00000398493 UBE2V1Q13404 147 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 MRAPQ8TCY5 172 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 TAX1BP3O14907 124 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 RPL39P62891 51 aaKnown RBP13.16□□□□□ -0.3
MBD1-208ENST00000398493 PMVKQ15126 192 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
MBD1-208ENST00000398493 P0DMU3 169 aa13.14□□□□□ -0.31
MBD1-208ENST00000398493 FAM231AP0DMU4 169 aa13.14□□□□□ -0.31
MBD1-208ENST00000398493 FAM231CP0DMU5 169 aa13.14□□□□□ -0.31
MBD1-208ENST00000398493 TCTAP57738 103 aa13.14□□□□□ -0.31
MBD1-208ENST00000398493 CSNK1G2-AS1Q8NCQ2 148 aa13.14□□□□□ -0.31
MBD1-208ENST00000398493 TRAV4A0A0B4J268 109 aa13.13□□□□□ -0.31
MBD1-208ENST00000398493 A8MZ25 164 aa13.13□□□□□ -0.31
MBD1-208ENST00000398493 CIDEAO60543 219 aa13.13□□□□□ -0.31
MBD1-208ENST00000398493 PTTG1IPP53801 180 aa13.13□□□□□ -0.31
MBD1-208ENST00000398493 Q6ZSN1 163 aa13.13□□□□□ -0.31
MBD1-208ENST00000398493 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
MBD1-208ENST00000398493 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
MBD1-208ENST00000398493 PCP2Q8IVA1 136 aa13.12□□□□□ -0.31
MBD1-208ENST00000398493 CST9LQ9H4G1 147 aa13.12□□□□□ -0.31
MBD1-208ENST00000398493 Q6ZTI0 123 aa13.11□□□□□ -0.31
MBD1-208ENST00000398493 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
MBD1-208ENST00000398493 OVOL2Q9BRP0 275 aa13.11□□□□□ -0.31
MBD1-208ENST00000398493 H3BRM9 83 aa13.1□□□□□ -0.31
MBD1-208ENST00000398493 VAMP3Q15836 100 aa13.1□□□□□ -0.31
MBD1-208ENST00000398493 PYGO1Q9Y3Y4 419 aa13.1□□□□□ -0.31
MBD1-208ENST00000398493 IGKV2D-26A0A0A0MRZ7 120 aa13.09□□□□□ -0.31
MBD1-208ENST00000398493 TRBV10-1A0A0K0K1A3 114 aa13.09□□□□□ -0.31
MBD1-208ENST00000398493 COTL1Q14019 142 aa13.09□□□□□ -0.31
MBD1-208ENST00000398493 TAL2Q16559 108 aa13.09□□□□□ -0.31
MBD1-208ENST00000398493 SBSPONQ8IVN8 264 aa13.09□□□□□ -0.31
MBD1-208ENST00000398493 ZNF479Q96JC4 524 aa13.09□□□□□ -0.31
MBD1-208ENST00000398493 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
MBD1-208ENST00000398493 HERVK_113P61574 105 aa13.08□□□□□ -0.32
MBD1-208ENST00000398493 RPL36AP83881 106 aaKnown RBP13.08□□□□□ -0.32
MBD1-208ENST00000398493 RPL36ALQ969Q0 106 aaKnown RBP13.08□□□□□ -0.32
MBD1-208ENST00000398493 VCX2Q9H322 139 aa13.08□□□□□ -0.32
MBD1-208ENST00000398493 CCL25O15444 150 aa13.07□□□□□ -0.32
MBD1-208ENST00000398493 CRYBA4P53673 196 aa13.07□□□□□ -0.32
MBD1-208ENST00000398493 OR11H2Q8NH07 326 aa13.07□□□□□ -0.32
MBD1-208ENST00000398493 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 K7EQD1 137 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 ZNRF2Q8NHG8 242 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 TRBV25-1A0A075B6N4 114 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 TRAV8-6A0A0B4J262 113 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 GAGE12BA1L429 117 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 GAGE7O76087 117 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 GAGE12FP0CL80 117 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 GAGE12GP0CL81 117 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 GAGE12IP0CL82 117 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 CHAC1Q9BUX1 264 aa13.06□□□□□ -0.32
MBD1-208ENST00000398493 IGLV4-69A0A075B6H9 119 aa13.05□□□□□ -0.32
MBD1-208ENST00000398493 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
MBD1-208ENST00000398493 E9PLD3 99 aa13.05□□□□□ -0.32
MBD1-208ENST00000398493 Q6ZVH6 145 aa13.05□□□□□ -0.32
MBD1-208ENST00000398493 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
MBD1-208ENST00000398493 Q9UF83 564 aa13.05□□□□□ -0.32
MBD1-208ENST00000398493 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
MBD1-208ENST00000398493 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
MBD1-208ENST00000398493 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
MBD1-208ENST00000398493 COL7A1Q02388 2944 aa13.04□□□□□ -0.32
MBD1-208ENST00000398493 IGLV4-3A0A075B6K6 122 aa13.04□□□□□ -0.32
MBD1-208ENST00000398493 C9orf118A6NHY6 69 aa13.04□□□□□ -0.32
MBD1-208ENST00000398493 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
MBD1-208ENST00000398493 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
MBD1-208ENST00000398493 TM2D2Q9BX73 214 aa13.04□□□□□ -0.32
MBD1-208ENST00000398493 KIR2DL5BQ8NHK3 375 aa13.03□□□□□ -0.32
MBD1-208ENST00000398493 OPRPNQ99935 248 aaPredicted RBP13.03□□□□□ -0.32
MBD1-208ENST00000398493 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
MBD1-208ENST00000398493 TENM3Q9P273 2699 aa13.03□□□□□ -0.32
MBD1-208ENST00000398493 IGHV3-38A0A0C4DH36 116 aa13.02□□□□□ -0.32
MBD1-208ENST00000398493 APOC4P55056 127 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms