RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CITED1Q99966 193 aa11.77□□□□□ -0.53
CCHCR1-202ENST00000396263 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
CCHCR1-202ENST00000396263 P0DMU3 169 aa11.76□□□□□ -0.53
CCHCR1-202ENST00000396263 FAM231AP0DMU4 169 aa11.76□□□□□ -0.53
CCHCR1-202ENST00000396263 FAM231CP0DMU5 169 aa11.76□□□□□ -0.53
CCHCR1-202ENST00000396263 TMEM170BQ5T4T1 132 aa11.76□□□□□ -0.53
CCHCR1-202ENST00000396263 ANKRD29Q8N6D5 301 aa11.76□□□□□ -0.53
CCHCR1-202ENST00000396263 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 TSPEAR-AS2P59090 65 aa11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 EDA2RQ9HAV5 297 aa11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 I3L3M4 83 aa11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 HERV-K104P63124 156 aa11.75□□□□□ -0.53
CCHCR1-202ENST00000396263 MXRA5Q9NR99 2828 aa11.74□□□□□ -0.53
CCHCR1-202ENST00000396263 A8MTW9 85 aa11.74□□□□□ -0.53
CCHCR1-202ENST00000396263 RBMY1A1P0DJD3 496 aaKnown RBP11.74□□□□□ -0.53
CCHCR1-202ENST00000396263 RBMY1CP0DJD4 496 aa11.74□□□□□ -0.53
CCHCR1-202ENST00000396263 RBMY1FQ15415 496 aaKnown RBP11.74□□□□□ -0.53
CCHCR1-202ENST00000396263 AMELXQ99217 191 aa11.74□□□□□ -0.53
CCHCR1-202ENST00000396263 CCDC179H3BU77 68 aa11.73□□□□□ -0.53
CCHCR1-202ENST00000396263 SBSPONQ8IVN8 264 aa11.73□□□□□ -0.53
CCHCR1-202ENST00000396263 SLC25A29Q8N8R3 303 aa11.73□□□□□ -0.53
CCHCR1-202ENST00000396263 TRBV20-1A0A075B6N2 111 aa11.72□□□□□ -0.53
CCHCR1-202ENST00000396263 A8MWV9 139 aa11.72□□□□□ -0.53
CCHCR1-202ENST00000396263 J3QQQ9 107 aa11.72□□□□□ -0.53
CCHCR1-202ENST00000396263 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 RHODO00212 210 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 CRLF1O75462 422 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 IGHV3-30P01768 117 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 IGHV3-30-5P0DP03 117 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 NDUFA11Q86Y39 141 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 SMIM20Q8N5G0 67 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 FAM110AQ9BQ89 295 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 VCX2Q9H322 139 aa11.71□□□□□ -0.53
CCHCR1-202ENST00000396263 TRAV4A0A0B4J268 109 aa11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 TMEM223A0PJW6 202 aa11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 SLURP1P55000 103 aa11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 NDUFV3P56181 108 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 Q8N2B8 174 aa11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 LEPROTO15243 131 aa11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 LGALS3P17931 250 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 DEFB131AP59861 70 aa11.7□□□□□ -0.54
CCHCR1-202ENST00000396263 IGLV4-3A0A075B6K6 122 aa11.69□□□□□ -0.54
CCHCR1-202ENST00000396263 H3BMM0 161 aa11.69□□□□□ -0.54
CCHCR1-202ENST00000396263 C18orf65Q6ZTR6 163 aa11.69□□□□□ -0.54
CCHCR1-202ENST00000396263 DEFB136Q30KP8 78 aa11.69□□□□□ -0.54
CCHCR1-202ENST00000396263 PIK3CD-AS1Q5SR53 167 aa11.69□□□□□ -0.54
CCHCR1-202ENST00000396263 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-202ENST00000396263 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
CCHCR1-202ENST00000396263 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
CCHCR1-202ENST00000396263 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE7O76087 117 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE4Q13068 117 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 LYRM7Q5U5X0 104 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 CFC1BP0CG36 223 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 CFC1P0CG37 223 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 NACAE9PAV3 2078 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 ACANP16112 2415 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 CUBNO60494 3623 aa11.67□□□□□ -0.54
CCHCR1-202ENST00000396263 M0R2P5 195 aa11.66□□□□□ -0.54
CCHCR1-202ENST00000396263 HTN1P15515 57 aa11.66□□□□□ -0.54
CCHCR1-202ENST00000396263 ANK3Q12955 4377 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 C4orf3Q8WVX3 66 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 IGHV3-73A0A0B4J1V6 119 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 SLC25A20O43772 301 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 SNCGO76070 127 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 SCGB1C2P0DMR2 95 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 PROK1P58294 105 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 ZNF415Q09FC8 603 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 C10orf126Q8N4M7 172 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 FAM104AQ969W3 186 aa11.65□□□□□ -0.54
CCHCR1-202ENST00000396263 KRTAP1-1Q07627 177 aa11.64□□□□□ -0.55
CCHCR1-202ENST00000396263 C9JAW5 83 aa11.64□□□□□ -0.55
CCHCR1-202ENST00000396263 LINC00467Q9BRT7 94 aa11.64□□□□□ -0.55
CCHCR1-202ENST00000396263 TNFRSF18Q9Y5U5 241 aa11.64□□□□□ -0.55
CCHCR1-202ENST00000396263 MYO9AB2RTY4 2548 aa11.64□□□□□ -0.55
CCHCR1-202ENST00000396263 IFITM1P13164 125 aa11.63□□□□□ -0.55
CCHCR1-202ENST00000396263 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-202ENST00000396263 MAP6D1Q9H9H5 199 aa11.63□□□□□ -0.55
CCHCR1-202ENST00000396263 CD28P10747 220 aa11.63□□□□□ -0.55
CCHCR1-202ENST00000396263 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
CCHCR1-202ENST00000396263 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
CCHCR1-202ENST00000396263 PRM2P04554 102 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms