RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SEC61GP60059 68 aa4.14□□□□□ -1.75
VPS13C-204ENST00000395898 LMO4P61968 165 aa4.14□□□□□ -1.75
VPS13C-204ENST00000395898 TTC28Q96AY4 2481 aa4.14□□□□□ -1.75
VPS13C-204ENST00000395898 NDUFC2O95298 119 aa4.14□□□□□ -1.75
VPS13C-204ENST00000395898 ZFAND2AQ8N6M9 145 aa4.14□□□□□ -1.75
VPS13C-204ENST00000395898 C14orf132Q9NPU4 83 aa4.14□□□□□ -1.75
VPS13C-204ENST00000395898 IGKV1D-37A0A075B6S9 117 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 NCR3O14931 201 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 HILS1P60008 231 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 WFDC9Q8NEX5 89 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 C11orf1Q9H5F2 150 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 NUPR1O60356 82 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 P0C879 139 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 RS1O15537 224 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 UFSP1Q6NVU6 142 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 LINC00173Q6ZV60 143 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 A0A1B0GXF2 115 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 LINC00269Q8N2A0 174 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 PLA2G2EQ9NZK7 142 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 TRAV26-1A0A087WT03 109 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 CCDC140Q96MF4 163 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 REG3AQ06141 175 aa4.13□□□□□ -1.75
VPS13C-204ENST00000395898 B5MCH6 92 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 IGHV4-31P0DP07 118 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 MIFP14174 115 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 WFDC2Q14508 124 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 Q6ZUT4 128 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 COX7BP24311 80 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 CDPF1Q6NVV7 123 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 MLST8Q9BVC4 326 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 H0Y9J4 135 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 K7EQG2 157 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 IGKV3D-7A0A0C4DH55 119 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 DEFB114Q30KQ6 69 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 CUL9Q8IWT3 2517 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 MSMPQ1L6U9 139 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 SPATA25Q9BR10 227 aa4.12□□□□□ -1.75
VPS13C-204ENST00000395898 G3V4G9 280 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 LINC00643Q86TS7 51 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 CLEC2BQ92478 149 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 DEFB4AO15263 64 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 EBI3Q14213 229 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 TRBV6-4A0A1B0GX49 114 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 ABCA2Q9BZC7 2435 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 TAX1BP3O14907 124 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 CRYGDP07320 174 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 DNAH12Q6ZR08 3092 aa4.11□□□□□ -1.75
VPS13C-204ENST00000395898 TRBV6-8A0A0A6YYG3 113 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 EIF4EBP1Q13541 118 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-204ENST00000395898 LY6LH3BQJ8 138 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 ZNF80P51504 273 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-204ENST00000395898 LINC01548A6NM66 108 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 IGLC6P0CF74 106 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 NEXN-AS1Q8NBZ9 246 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 TP53TG3Q9ULZ0 132 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 DEFB131BA0A096LNP1 70 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 CRYGBP07316 175 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 CACNA1AO00555 2505 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 BPY2O14599 106 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 FAM222AQ5U5X8 452 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 LINC00467Q9BRT7 94 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 Q6ZTI0 123 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 NFE4Q86UQ8 179 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 PSMG3-AS1Q96PY0 264 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 SHISA2Q6UWI4 295 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 RNF183Q96D59 192 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 J3KT08 172 aa4.1□□□□□ -1.75
VPS13C-204ENST00000395898 SPANXB1Q9NS25 103 aaPredicted RBP4.1□□□□□ -1.75
VPS13C-204ENST00000395898 IGKV2D-26A0A0A0MRZ7 120 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 TCL1BO95988 128 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 DEFB1P60022 68 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 C11orf71Q6IPW1 123 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-204ENST00000395898 ZFAND3Q9H8U3 227 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 TRBV27A0A0K0K1C4 114 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 TMEM223A0PJW6 202 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 P0DMU3 169 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 FAM231AP0DMU4 169 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 FAM231CP0DMU5 169 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 COX17Q14061 63 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 LINC00322Q6ZN03 302 aaPredicted RBP4.09□□□□□ -1.75
VPS13C-204ENST00000395898 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 PYGO1Q9Y3Y4 419 aa4.09□□□□□ -1.75
VPS13C-204ENST00000395898 PLA2G5P39877 138 aa4.09□□□□□ -1.76
VPS13C-204ENST00000395898 UPK3BQ9BT76 320 aa4.09□□□□□ -1.76
VPS13C-204ENST00000395898 IGLV4-3A0A075B6K6 122 aa4.09□□□□□ -1.76
VPS13C-204ENST00000395898 PIEZO2Q9H5I5 2752 aa4.09□□□□□ -1.76
VPS13C-204ENST00000395898 IGKV4-1P06312 121 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 M0QY20 66 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 CEMP1Q6PRD7 247 aaPredicted RBP4.08□□□□□ -1.76
VPS13C-204ENST00000395898 IGLV2-8P01709 118 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 TIMM17BO60830 172 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 ATP5EP2Q5VTU8 51 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 MUC7Q8TAX7 377 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 HIVEP3Q5T1R4 2406 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 PIK3CD-AS1Q5SR53 167 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 ZNF843Q8N446 348 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms