RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GAGE1Q13065 139 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 IGFL4Q6B9Z1 124 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 ERG28Q9UKR5 140 aa2.54□□□□□ -2
VPS13C-203ENST00000395896 TRBV12-3P01733 135 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 RIPPLY3P57055 190 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 AVPP01185 164 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 E9PLD3 99 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 J3QQQ9 107 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 PAX4O43316 350 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 FSHBP01225 129 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 MPV17L2Q567V2 206 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 PRR31Q5SQ13 230 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 VPS13CQ709C8 3753 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 CRLF1O75462 422 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 ADAMTSL5Q6ZMM2 481 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 PRO1854Q9UHT4 67 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 INAFM2P0DMQ5 153 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 HLA-DMBP28068 263 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 LINC00467Q9BRT7 94 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 NOP10Q9NPE3 64 aaKnown RBP2.53□□□□□ -2
VPS13C-203ENST00000395896 PRSS29PA6NIE9 313 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 F5H768 121 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 TRAV8-4A0A0B4J246 113 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 C11orf86A6NJI1 115 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 F6UB75 175 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 F8W1H4 67 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 GNRH2O43555 120 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 RPL35AP18077 110 aaKnown RBP2.53□□□□□ -2
VPS13C-203ENST00000395896 LINC00322Q6ZN03 302 aaPredicted RBP2.53□□□□□ -2
VPS13C-203ENST00000395896 NHP2Q9NX24 153 aaKnown RBP2.53□□□□□ -2
VPS13C-203ENST00000395896 TOMM7Q9P0U1 55 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 MDFICQ9P1T7 246 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 NBPF19A0A087WUL8 3843 aa2.53□□□□□ -2
VPS13C-203ENST00000395896 IGHV3-16A0A0C4DH30 117 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 KIR3DS1Q14943 382 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 ODF1Q14990 250 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 SPCS1Q9Y6A9 102 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 FHL3Q13643 280 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 ATP6V0E2Q8NHE4 81 aa2.53□□□□□ -2.01
VPS13C-203ENST00000395896 PRAC2D3DTV9 90 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 ZNF561-AS1K7EIQ3 104 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 ZNF80P51504 273 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-203ENST00000395896 C9orf85Q96MD7 179 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 TRAV26-1A0A087WT03 109 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 CRIP1P50238 77 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 SAMD5Q5TGI4 173 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 M0QY20 66 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 UBE2V1Q13404 147 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 POLR2KP53803 58 aaKnown RBP2.52□□□□□ -2.01
VPS13C-203ENST00000395896 SLC25A29Q8N8R3 303 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 GTSF1LQ9H1H1 148 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 JPT2Q9H910 190 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE13Q4V321 117 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 SUMO4Q6EEV6 95 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 SCRT2Q9NQ03 307 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 TENM2Q9NT68 2774 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 A0A0J9YXY3 114 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE12BA1L429 117 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 NDUFA12Q9UI09 145 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 TRAV13-1A0A0B4J241 112 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 SMKR1H3BMG3 65 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 NXPH4O95158 308 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 CCL18P55774 89 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 PROK1P58294 105 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 S100A7L2Q5SY68 101 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 EDA2RQ9HAV5 297 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 PKD1L1Q8TDX9 2849 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 FGF6P10767 208 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 RNASE3P12724 160 aaKnown RBP2.52□□□□□ -2.01
VPS13C-203ENST00000395896 MRPS36P82909 103 aaKnown RBP2.52□□□□□ -2.01
VPS13C-203ENST00000395896 BVES-AS1Q5T3Y7 98 aa2.52□□□□□ -2.01
VPS13C-203ENST00000395896 SOCS3O14543 225 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE7O76087 117 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE12FP0CL80 117 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE12GP0CL81 117 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 GAGE12IP0CL82 117 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 ICOSQ9Y6W8 199 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 IGHV1-58A0A0C4DH39 117 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 MSRB1Q9NZV6 116 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TIRAPP58753 221 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 CUBNO60494 3623 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 KNCNA6PVL3 124 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 STPG4Q8N801 248 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 H0YGX0 51 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 ANGP03950 147 aaKnown RBP2.51□□□□□ -2.01
VPS13C-203ENST00000395896 A0A1B0GV90 55 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TINCRA0A1B0GVN0 87 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 hDV102S1A0JD36 115 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TRAV8-2A0A0B4J237 113 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TM2D2Q9BX73 214 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 INAFM1C9JVW0 142 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TIMM17BO60830 172 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 NRACQ8N912 160 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 ATXN8Q156A1 80 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 ZNF124Q15973 351 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 DEFB121Q5J5C9 76 aa2.51□□□□□ -2.01
VPS13C-203ENST00000395896 TP73-AS1Q9UF72 201 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms