RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 FAM216BQ8N7L0 139 aa6.67□□□□□ -1.34
MSH5-205ENST00000395853 DEFB108BQ8NET1 73 aa6.67□□□□□ -1.34
MSH5-205ENST00000395853 FANCD2OSQ96PS1 177 aa6.67□□□□□ -1.34
MSH5-205ENST00000395853 GP9P14770 177 aa6.66□□□□□ -1.34
MSH5-205ENST00000395853 SAA4P35542 130 aa6.66□□□□□ -1.34
MSH5-205ENST00000395853 DAZ2Q13117 558 aaKnown RBP6.66□□□□□ -1.34
MSH5-205ENST00000395853 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
MSH5-205ENST00000395853 Q9UF83 564 aa6.66□□□□□ -1.34
MSH5-205ENST00000395853 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
MSH5-205ENST00000395853 ACANP16112 2415 aa6.66□□□□□ -1.34
MSH5-205ENST00000395853 PAPPA-AS1Q5QFB9 102 aa6.66□□□□□ -1.34
MSH5-205ENST00000395853 Q6JHZ5 121 aa6.66□□□□□ -1.34
MSH5-205ENST00000395853 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 TRBV7-6A0A0J9YX20 115 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 RBM3P98179 157 aaKnown RBP6.65□□□□□ -1.34
MSH5-205ENST00000395853 PRCDQ00LT1 54 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 BSPH1Q075Z2 132 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 LEAP2Q969E1 77 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 KLK15Q9H2R5 256 aa6.65□□□□□ -1.34
MSH5-205ENST00000395853 HILS1P60008 231 aa6.65□□□□□ -1.35
MSH5-205ENST00000395853 CFHR3Q02985 330 aa6.65□□□□□ -1.35
MSH5-205ENST00000395853 C1orf229Q6ZS94 237 aaPredicted RBP6.65□□□□□ -1.35
MSH5-205ENST00000395853 CCL13Q99616 98 aa6.65□□□□□ -1.35
MSH5-205ENST00000395853 MDFIQ99750 246 aa6.65□□□□□ -1.35
MSH5-205ENST00000395853 TRBV19A0A075B6N1 114 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 GHRHP01286 108 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 TSPEAR-AS2P59090 65 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 C17orf58Q2M2W7 97 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 RPL39P5Q59GN2 51 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 MRPL53Q96EL3 112 aaKnown RBP6.64□□□□□ -1.35
MSH5-205ENST00000395853 MSRB1Q9NZV6 116 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 MOB4Q9Y3A3 225 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 SH2D1AO60880 128 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 CGB3P0DN86 165 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 CGB7P0DN87 165 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
MSH5-205ENST00000395853 KRTAP1-3Q8IUG1 177 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 GAFA1Q96PS6 74 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 AMELXQ99217 191 aa6.64□□□□□ -1.35
MSH5-205ENST00000395853 IGHV3OR16-10A0A075B7F0 116 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 LOXP28300 417 aaPredicted RBP6.63□□□□□ -1.35
MSH5-205ENST00000395853 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 LY6G6DO95868 133 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 C11orf45Q8TAV5 145 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 I3L3M4 83 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 VSIG2Q96IQ7 327 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 SMR3AQ99954 134 aa6.63□□□□□ -1.35
MSH5-205ENST00000395853 ZNF469Q96JG9 3925 aaPredicted RBP6.63□□□□□ -1.35
MSH5-205ENST00000395853 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
MSH5-205ENST00000395853 ARFGEF3Q5TH69 2177 aa6.62□□□□□ -1.35
MSH5-205ENST00000395853 IGKV1D-37A0A075B6S9 117 aa6.62□□□□□ -1.35
MSH5-205ENST00000395853 SUB1P53999 127 aaKnown RBP eCLIP6.62□□□□□ -1.352e-7■■□□□ 14.2
MSH5-205ENST00000395853 ZNF491Q8N8L2 437 aa6.62□□□□□ -1.35
MSH5-205ENST00000395853 FLNAP21333 2647 aaKnown RBP6.62□□□□□ -1.35
MSH5-205ENST00000395853 THAP8Q8NA92 274 aa6.62□□□□□ -1.35
MSH5-205ENST00000395853 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
MSH5-205ENST00000395853 AKAP6Q13023 2319 aa6.61□□□□□ -1.35
MSH5-205ENST00000395853 ZNRD1Q9P1U0 126 aa6.61□□□□□ -1.35
MSH5-205ENST00000395853 FN1P02751 2386 aaKnown RBP6.61□□□□□ -1.35
MSH5-205ENST00000395853 NSD1Q96L73 2696 aaPredicted RBP6.61□□□□□ -1.35
MSH5-205ENST00000395853 E7EQL1 145 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 DNAL4O96015 105 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 SAA2P0DJI9 122 aaPredicted RBP6.6□□□□□ -1.35
MSH5-205ENST00000395853 EGR2P11161 476 aaPredicted RBP6.6□□□□□ -1.35
MSH5-205ENST00000395853 RUSC1-AS1Q66K80 236 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 E7EUB6 86 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
MSH5-205ENST00000395853 ERHP84090 104 aaKnown RBP6.6□□□□□ -1.35
MSH5-205ENST00000395853 PLGLAQ15195 96 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 CCL17Q92583 94 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 CSPG4Q6UVK1 2322 aa6.6□□□□□ -1.35
MSH5-205ENST00000395853 TNCP24821 2201 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 TRAV12-3A0A0B4J271 114 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 LYPD2Q6UXB3 125 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 LINC01560Q8TB33 94 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 UBE2E2Q96LR5 201 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 RBM12B-AS1Q9P1G2 102 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 IGHV3-48P01763 117 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 DGAT2L7PQ6IED9 249 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 TMEM14CQ9P0S9 112 aa6.59□□□□□ -1.35
MSH5-205ENST00000395853 TEX22C9J3V5 150 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 H3BS24 57 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 M0R1W7 72 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 CCL3L1P16619 93 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 FAM222AQ5U5X8 452 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 LY6G5BQ8NDX9 201 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 LINC00574Q9H8X3 128 aa6.58□□□□□ -1.36
MSH5-205ENST00000395853 SDHAF1A6NFY7 115 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms