RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 TM2D3Q9BRN9 247 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 WNK3Q9BYP7 1800 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 LY6G6EA0A0G2JKS1 128 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 TSHBP01222 138 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 B3GALT5-AS1P59052 145 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 SPTBP11277 2137 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 RPL37AP61513 92 aaKnown RBP2.39□□□□□ -2.03
PHF3-202ENST00000393387 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 COL11A1P12107 1806 aaPredicted RBP2.39□□□□□ -2.03
PHF3-202ENST00000393387 CRIP1P50238 77 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 Q6ZTC4 211 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 Q9BRP9 147 aa2.39□□□□□ -2.03
PHF3-202ENST00000393387 ECM29Q5VYK3 1845 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 IGLV4-69A0A075B6H9 119 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 SYCNQ0VAF6 134 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 RBM12B-AS1Q9P1G2 102 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 RBBP6Q7Z6E9 1792 aaKnown RBP2.38□□□□□ -2.03
PHF3-202ENST00000393387 IGLV11-55A0A075B6I3 123 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.38□□□□□ -2.03
PHF3-202ENST00000393387 NHLRC4P0CG21 123 aaPredicted RBP2.38□□□□□ -2.03
PHF3-202ENST00000393387 C9orf66Q5T8R8 295 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 LINC01600Q96MT4 127 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 MAP6D1Q9H9H5 199 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 ERC2-IT1O76042 136 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 IGFL3Q6UXB1 125 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 ANKRD36A6QL64 1941 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 SNRNP200O75643 2136 aaKnown RBP2.38□□□□□ -2.03
PHF3-202ENST00000393387 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 BBC3Q96PG8 261 aaPredicted RBP2.38□□□□□ -2.03
PHF3-202ENST00000393387 ZNF702PQ9H963 129 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 LAMB2P55268 1798 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 RALGAPA1Q6GYQ0 2036 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 SCN1AP35498 2009 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 UBR2Q8IWV8 1755 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 C9orf129Q5T035 196 aaKnown RBP2.38□□□□□ -2.03
PHF3-202ENST00000393387 PRO0255Q9UI72 69 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 U3KQK5 164 aa2.38□□□□□ -2.03
PHF3-202ENST00000393387 ARAP2Q8WZ64 1704 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 FER1L4A9Z1Z3 1794 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 DOCK11Q5JSL3 2073 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 M0QY20 66 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 ZNF236Q9UL36 1845 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 A0A0D9SG42 100 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 IGLV2-11P01706 119 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 COA5Q86WW8 74 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 CHCHD7Q9BUK0 85 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 MYLKQ15746 1914 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 TRBV6-8A0A0A6YYG3 113 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 A0A0J9YX75 114 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 LINC00310P59036 64 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 RPS28P62857 69 aaKnown RBP2.37□□□□□ -2.03
PHF3-202ENST00000393387 UNQ6190/PRO20217Q6UXQ8 127 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 C11orf45Q8TAV5 145 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 C7orf33Q8WU49 177 aa2.37□□□□□ -2.03
PHF3-202ENST00000393387 PRR9Q5T870 116 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 TNRC6CQ9HCJ0 1690 aaKnown RBP2.36□□□□□ -2.03
PHF3-202ENST00000393387 SMCPP49901 116 aaPredicted RBP2.36□□□□□ -2.03
PHF3-202ENST00000393387 URB1-AS1Q96HZ7 61 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 KDM3BQ7LBC6 1761 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 HEATR5AQ86XA9 2040 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 SBF2Q86WG5 1849 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 ANK1P16157 1881 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 DAZAP2Q15038 168 aaPredicted RBP2.36□□□□□ -2.03
PHF3-202ENST00000393387 TRAV22A0A0B4J277 110 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 CDSNQ15517 529 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 NUP214P35658 2090 aaPredicted RBP2.36□□□□□ -2.03
PHF3-202ENST00000393387 PI4KAP42356 2102 aa2.36□□□□□ -2.03
PHF3-202ENST00000393387 CKAP5Q14008 2032 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 DOCK6Q96HP0 2047 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 LRRK1Q38SD2 2015 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 ZFP36P26651 326 aaKnown RBP2.35□□□□□ -2.03
PHF3-202ENST00000393387 CSNK1G2-AS1Q8NCQ2 148 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 SMAD5-AS1Q9Y6J3 95 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 DOT1LQ8TEK3 1739 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 RGPD2P0DJD1 1756 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 A0A1B0GW54 56 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 TRBV6-4A0A1B0GX49 114 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 SCN10AQ9Y5Y9 1956 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 RGPD8O14715 1765 aaPredicted RBP2.35□□□□□ -2.03
PHF3-202ENST00000393387 DEFB131BA0A096LNP1 70 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 LINC01556Q5JQF7 62 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 SPATA3Q8NHX4 192 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 CDC42SE1Q9NRR8 79 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 C11orf21Q9P2W6 132 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 POLR2AP24928 1970 aaKnown RBP2.35□□□□□ -2.03
PHF3-202ENST00000393387 DOCK4Q8N1I0 1966 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 RGPD5Q99666 1765 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 INAFM1C9JVW0 142 aa2.35□□□□□ -2.03
PHF3-202ENST00000393387 ARFGEF1Q9Y6D6 1849 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 MRGPRG-AS1Q2M3A8 158 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 C11orf1Q9H5F2 150 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 KIDINS220Q9ULH0 1771 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 KNTC1P50748 2209 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 TUBGCP6Q96RT7 1819 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms