RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 C2orf48Q96LS8 159 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 IGLV2-18A0A075B6J9 118 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 PAX4O43316 350 aa5.77□□□□□ -1.49
VTI1A-201ENST00000393077 NBR2O15453 112 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 LINC00158P58513 81 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
VTI1A-201ENST00000393077 Q5XG85 94 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 IGFL2Q6UWQ7 119 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 Q6ZSV7 163 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 NDUFC1O43677 76 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 TRBV12-3P01733 135 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 PRRC2AP48634 2157 aaKnown RBP5.76□□□□□ -1.49
VTI1A-201ENST00000393077 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 TRBV7-6A0A0J9YX20 115 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 BUB1B-PAK6H3BSN5 160 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 CNFNQ9BYD5 112 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 Q9H8V8 135 aa5.76□□□□□ -1.49
VTI1A-201ENST00000393077 NAV2Q8IVL1 2488 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 TLN2Q9Y4G6 2542 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 USP9YO00507 2555 aaPredicted RBP5.75□□□□□ -1.49
VTI1A-201ENST00000393077 BLCAPP62952 87 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 RPL36AP83881 106 aaKnown RBP5.75□□□□□ -1.49
VTI1A-201ENST00000393077 FHL2Q14192 279 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 C9orf139Q6ZV77 190 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 WFDC9Q8NEX5 89 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
VTI1A-201ENST00000393077 ORMDL1Q9P0S3 153 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 PRAC2D3DTV9 90 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 CFAP54Q96N23 3096 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 C2CD3Q4AC94 2353 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 SPEGQ15772 3267 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 IGHV1-58A0A0C4DH39 117 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 EPG5Q9HCE0 2579 aa5.75□□□□□ -1.49
VTI1A-201ENST00000393077 H0YGX0 51 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 LECT2O14960 151 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 FSTL3O95633 263 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 DEFB121Q5J5C9 76 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 GAFA1Q96PS6 74 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 IGHV3OR16-10A0A075B7F0 116 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 HOXB4P17483 251 aaPredicted RBP5.74□□□□□ -1.49
VTI1A-201ENST00000393077 SEM1Q6ZVN7 128 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 MYO9AB2RTY4 2548 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 LRRK2Q5S007 2527 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 TMEM89A2RUT3 159 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 I3L2K1 104 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 IGKV3-20P01619 116 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 CLEC19AQ6UXS0 136 aa5.74□□□□□ -1.49
VTI1A-201ENST00000393077 IGLV4-69A0A075B6H9 119 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 IGLV1-44P01699 117 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 GNLYP22749 145 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 E7EQL1 145 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 IGHV1-69P01742 117 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 GRNP28799 593 aaKnown RBP5.73□□□□□ -1.49
VTI1A-201ENST00000393077 KHDC1LQ5JSQ8 128 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 LYPD2Q6UXB3 125 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 REV3LO60673 3130 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 PCSK5Q92824 1860 aa5.73□□□□□ -1.49
VTI1A-201ENST00000393077 IGHV1-3A0A0C4DH29 117 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 TMEM178BH3BS89 294 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 NCR3O14931 201 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 GNRH2O43555 120 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 ZNF672Q499Z4 452 aaPredicted RBP5.72□□□□□ -1.49
VTI1A-201ENST00000393077 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 JMJD7-PLA2G4BH0Y9G9 81 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 FUSP35637 526 aaKnown RBP eCLIP5.72□□□□□ -1.49
VTI1A-201ENST00000393077 SS18Q15532 418 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 HIST2H2BCQ6DN03 193 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 HIST2H2BDQ6DRA6 164 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 TEX22C9J3V5 150 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 K7EIM0 57 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 FAM222AQ5U5X8 452 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 DCANP1Q8TF63 244 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 SONP18583 2426 aaKnown RBP5.72□□□□□ -1.49
VTI1A-201ENST00000393077 A0A0J9YX75 114 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 HILS1P60008 231 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 PIK3CD-AS1Q5SR53 167 aa5.72□□□□□ -1.49
VTI1A-201ENST00000393077 USP9XQ93008 2570 aaPredicted RBP5.71□□□□□ -1.5
VTI1A-201ENST00000393077 HIVEP3Q5T1R4 2406 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 ABCA2Q9BZC7 2435 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 CD164Q04900 197 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 RMI2Q96E14 147 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 TRBV27A0A0K0K1C4 114 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 CCKP06307 115 aa5.71□□□□□ -1.5
VTI1A-201ENST00000393077 SETD2Q9BYW2 2564 aaPredicted RBP5.71□□□□□ -1.5
VTI1A-201ENST00000393077 IGIPA6NJ69 53 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 A8MZ25 164 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 IGHV1-8P0DP01 117 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 C15orf32Q32M92 178 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 LINC00308Q8TCZ7 52 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 FRYLO94915 3013 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 C20orf203Q8NBC4 194 aa5.7□□□□□ -1.5
VTI1A-201ENST00000393077 CELSR3Q9NYQ7 3312 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 510.1 ms