RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 EPG5Q9HCE0 2579 aa13.25□□□□□ -0.29
ERCC2-201ENST00000391941 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
ERCC2-201ENST00000391941 LEPROTO15243 131 aa13.25□□□□□ -0.29
ERCC2-201ENST00000391941 FAM104AQ969W3 186 aa13.25□□□□□ -0.29
ERCC2-201ENST00000391941 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 BRI3O95415 125 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 CD28P10747 220 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 TEX15Q9BXT5 2789 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 Q6ZSN1 163 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 FAM208BQ5VWN6 2430 aa13.24□□□□□ -0.29
ERCC2-201ENST00000391941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.23□□□□□ -0.29
ERCC2-201ENST00000391941 IGKV2-29A2NJV5 120 aaPredicted RBP13.23□□□□□ -0.29
ERCC2-201ENST00000391941 IGHV4-59P01825 116 aa13.23□□□□□ -0.29
ERCC2-201ENST00000391941 PKD1L2Q7Z442 2459 aa13.23□□□□□ -0.29
ERCC2-201ENST00000391941 ABCA12Q86UK0 2595 aa13.23□□□□□ -0.29
ERCC2-201ENST00000391941 ZFYVE26Q68DK2 2539 aa13.23□□□□□ -0.29
ERCC2-201ENST00000391941 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 A0A0J9YX75 114 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 RHOHQ15669 191 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 DEFB136Q30KP8 78 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 ZNF625Q96I27 306 aaPredicted RBP13.22□□□□□ -0.29
ERCC2-201ENST00000391941 CITED1Q99966 193 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 PTPN13Q12923 2485 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 SONP18583 2426 aaKnown RBP13.22□□□□□ -0.29
ERCC2-201ENST00000391941 B5MCH6 92 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 GNLYP22749 145 aa13.22□□□□□ -0.29
ERCC2-201ENST00000391941 NBPF19A0A087WUL8 3843 aa13.21□□□□□ -0.29
ERCC2-201ENST00000391941 K7EMT4 169 aa13.21□□□□□ -0.3
ERCC2-201ENST00000391941 LINC01620Q4KN68 170 aa13.21□□□□□ -0.3
ERCC2-201ENST00000391941 I3L3M4 83 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 UCNP55089 124 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 CFHR3Q02985 330 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 ZFAND6Q6FIF0 208 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 TEX29Q8N6K0 151 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 ACACBO00763 2458 aa13.2□□□□□ -0.3
ERCC2-201ENST00000391941 NHLRC4P0CG21 123 aaPredicted RBP13.19□□□□□ -0.3
ERCC2-201ENST00000391941 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
ERCC2-201ENST00000391941 TTC32Q5I0X7 151 aa13.19□□□□□ -0.3
ERCC2-201ENST00000391941 LITAFQ99732 161 aa13.19□□□□□ -0.3
ERCC2-201ENST00000391941 ZNF469Q96JG9 3925 aaPredicted RBP13.19□□□□□ -0.3
ERCC2-201ENST00000391941 A0A0B4J2C4 111 aa13.18□□□□□ -0.3
ERCC2-201ENST00000391941 M0R2P5 195 aa13.18□□□□□ -0.3
ERCC2-201ENST00000391941 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
ERCC2-201ENST00000391941 SNRPD3P62318 126 aaKnown RBP13.18□□□□□ -0.3
ERCC2-201ENST00000391941 C3orf56Q8N813 242 aa13.18□□□□□ -0.3
ERCC2-201ENST00000391941 ANKRD17O75179 2603 aaKnown RBP13.17□□□□□ -0.3
ERCC2-201ENST00000391941 NDUFA12Q9UI09 145 aa13.17□□□□□ -0.3
ERCC2-201ENST00000391941 NDUFA7O95182 113 aa13.16□□□□□ -0.3
ERCC2-201ENST00000391941 ATP5J2P56134 94 aa13.16□□□□□ -0.3
ERCC2-201ENST00000391941 CCDC179H3BU77 68 aa13.15□□□□□ -0.3
ERCC2-201ENST00000391941 ODF3Q96PU9 254 aa13.15□□□□□ -0.3
ERCC2-201ENST00000391941 K7EQG2 157 aa13.15□□□□□ -0.3
ERCC2-201ENST00000391941 PSMB8P28062 276 aa13.15□□□□□ -0.3
ERCC2-201ENST00000391941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.15□□□□□ -0.3
ERCC2-201ENST00000391941 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.14□□□□□ -0.31
ERCC2-201ENST00000391941 TMEM262E9PQX1 116 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 SNCGO76070 127 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 ATXN8Q156A1 80 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 DEFB112Q30KQ8 113 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 NAV2Q8IVL1 2488 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 CCL19Q99731 98 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 H7C423 109 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 ICOSQ9Y6W8 199 aa13.14□□□□□ -0.31
ERCC2-201ENST00000391941 DEFB131AP59861 70 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 GAGE2BQ13066 116 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 GAGE2EQ4V326 116 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 GAGE2DQ9UEU5 116 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 IGSF10Q6WRI0 2623 aa13.13□□□□□ -0.31
ERCC2-201ENST00000391941 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
ERCC2-201ENST00000391941 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
ERCC2-201ENST00000391941 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
ERCC2-201ENST00000391941 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
ERCC2-201ENST00000391941 MSMBP08118 114 aa13.11□□□□□ -0.31
ERCC2-201ENST00000391941 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
ERCC2-201ENST00000391941 SLURP1P55000 103 aa13.11□□□□□ -0.31
ERCC2-201ENST00000391941 CDKN2A-AS1Q9UH64 79 aa13.11□□□□□ -0.31
ERCC2-201ENST00000391941 M0QXV9 152 aa13.11□□□□□ -0.31
ERCC2-201ENST00000391941 IGHV3OR16-12A0A075B7B8 117 aa13.1□□□□□ -0.31
ERCC2-201ENST00000391941 HOXD3P31249 432 aaPredicted RBP13.1□□□□□ -0.31
ERCC2-201ENST00000391941 RPL13AP40429 203 aaKnown RBP13.1□□□□□ -0.31
ERCC2-201ENST00000391941 NDUFV3P56181 108 aaKnown RBP13.1□□□□□ -0.31
ERCC2-201ENST00000391941 MRPS36P82909 103 aaKnown RBP13.1□□□□□ -0.31
ERCC2-201ENST00000391941 H3BMM0 161 aa13.1□□□□□ -0.31
ERCC2-201ENST00000391941 COX6A2Q02221 97 aa13.1□□□□□ -0.31
ERCC2-201ENST00000391941 UBE2WQ96B02 151 aa13.1□□□□□ -0.31
ERCC2-201ENST00000391941 IGHV1-58A0A0C4DH39 117 aa13.09□□□□□ -0.31
ERCC2-201ENST00000391941 TRGV11A0A075B6L2 103 aa13.09□□□□□ -0.31
ERCC2-201ENST00000391941 TRBV30A0A0K0K1B3 111 aa13.09□□□□□ -0.31
ERCC2-201ENST00000391941 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
ERCC2-201ENST00000391941 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
ERCC2-201ENST00000391941 DOPEY1Q5JWR5 2465 aa13.09□□□□□ -0.31
ERCC2-201ENST00000391941 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
ERCC2-201ENST00000391941 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms