RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PRSS29PA6NIE9 313 aa14.14□□□□□ -0.15
SSU72-204ENST00000378726 WFDC10AQ9H1F0 79 aa14.14□□□□□ -0.15
SSU72-204ENST00000378726 RRN3P1Q2M238 152 aa14.13□□□□□ -0.15
SSU72-204ENST00000378726 TENM1Q9UKZ4 2725 aa14.13□□□□□ -0.15
SSU72-204ENST00000378726 F5H697 171 aa14.13□□□□□ -0.15
SSU72-204ENST00000378726 FAM74A4Q5TZK3 123 aa14.13□□□□□ -0.15
SSU72-204ENST00000378726 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
SSU72-204ENST00000378726 PRADC1Q9BSG0 188 aa14.13□□□□□ -0.15
SSU72-204ENST00000378726 A0A1B0GWB2 263 aa14.12□□□□□ -0.15
SSU72-204ENST00000378726 CRYGDP07320 174 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 MTURNQ8N3F0 131 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 PPP1R17O96001 155 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 C1orf158Q8N1D5 194 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 SPATA3Q8NHX4 192 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 DEFB104AQ8WTQ1 72 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 ATRQ13535 2644 aa14.11□□□□□ -0.15
SSU72-204ENST00000378726 ZNF415Q09FC8 603 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 SUMO4Q6EEV6 95 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 SH2D6Q7Z4S9 175 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 IGHV3OR16-12A0A075B7B8 117 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 ETDBQ3ZM63 59 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 GAGE13Q4V321 117 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 PLEKHB2Q96CS7 222 aa14.1□□□□□ -0.15
SSU72-204ENST00000378726 MORN3Q6PF18 240 aaPredicted RBP14.09□□□□□ -0.15
SSU72-204ENST00000378726 TEP1Q99973 2627 aaKnown RBP14.09□□□□□ -0.15
SSU72-204ENST00000378726 BAHCC1Q9P281 2608 aa14.09□□□□□ -0.15
SSU72-204ENST00000378726 M0R2P5 195 aa14.09□□□□□ -0.15
SSU72-204ENST00000378726 RPL35AP18077 110 aaKnown RBP14.09□□□□□ -0.15
SSU72-204ENST00000378726 INSL3P51460 131 aa14.09□□□□□ -0.15
SSU72-204ENST00000378726 VWFP04275 2813 aa14.08□□□□□ -0.16
SSU72-204ENST00000378726 ZNF815PA8K554 130 aa14.08□□□□□ -0.16
SSU72-204ENST00000378726 TSHBP01222 138 aa14.08□□□□□ -0.16
SSU72-204ENST00000378726 C11orf72Q8NBR9 251 aa14.08□□□□□ -0.16
SSU72-204ENST00000378726 PRO0461Q9UI25 63 aa14.08□□□□□ -0.16
SSU72-204ENST00000378726 NOTCH3Q9UM47 2321 aa14.08□□□□□ -0.16
SSU72-204ENST00000378726 C9orf66Q5T8R8 295 aa14.07□□□□□ -0.16
SSU72-204ENST00000378726 GIG44P09565 113 aaPredicted RBP14.07□□□□□ -0.16
SSU72-204ENST00000378726 ZNF56Q15929 161 aa14.07□□□□□ -0.16
SSU72-204ENST00000378726 CYSRT1A8MQ03 144 aa14.06□□□□□ -0.16
SSU72-204ENST00000378726 EMP1P54849 157 aa14.06□□□□□ -0.16
SSU72-204ENST00000378726 SPXQ9BT56 116 aa14.06□□□□□ -0.16
SSU72-204ENST00000378726 C11orf86A6NJI1 115 aa14.05□□□□□ -0.16
SSU72-204ENST00000378726 PGPEP1Q9NXJ5 209 aa14.05□□□□□ -0.16
SSU72-204ENST00000378726 TP53TG1Q9Y2A0 90 aa14.05□□□□□ -0.16
SSU72-204ENST00000378726 IGLV4-69A0A075B6H9 119 aa14.05□□□□□ -0.16
SSU72-204ENST00000378726 SCGB1D4Q6XE38 83 aa14.05□□□□□ -0.16
SSU72-204ENST00000378726 PTH2Q96A98 100 aa14.05□□□□□ -0.16
SSU72-204ENST00000378726 M0QY20 66 aa14.04□□□□□ -0.16
SSU72-204ENST00000378726 PIK3CD-AS1Q5SR53 167 aa14.04□□□□□ -0.16
SSU72-204ENST00000378726 IGIPA6NJ69 53 aa14.03□□□□□ -0.16
SSU72-204ENST00000378726 A8MWV9 139 aa14.03□□□□□ -0.16
SSU72-204ENST00000378726 ZFP2Q6ZN57 461 aa14.03□□□□□ -0.16
SSU72-204ENST00000378726 POLR2KP53803 58 aaKnown RBP14.03□□□□□ -0.16
SSU72-204ENST00000378726 RPL39P62891 51 aaKnown RBP14.03□□□□□ -0.16
SSU72-204ENST00000378726 IGHV3-73A0A0B4J1V6 119 aa14.02□□□□□ -0.16
SSU72-204ENST00000378726 LINC01549A6NIU2 74 aa14.02□□□□□ -0.16
SSU72-204ENST00000378726 CKS1BP61024 79 aa14.02□□□□□ -0.16
SSU72-204ENST00000378726 SRSF9Q13242 221 aaKnown RBP eCLIP14.02□□□□□ -0.16
SSU72-204ENST00000378726 C1QTNF4Q9BXJ3 329 aa14.02□□□□□ -0.16
SSU72-204ENST00000378726 MRPL16Q9NX20 251 aaKnown RBP14.02□□□□□ -0.16
SSU72-204ENST00000378726 RPL32P62910 135 aaKnown RBP14.01□□□□□ -0.17
SSU72-204ENST00000378726 TRBV6-5A0A0K0K1A5 114 aa14□□□□□ -0.17
SSU72-204ENST00000378726 VCYO14598 125 aa14□□□□□ -0.17
SSU72-204ENST00000378726 UBE2D1P51668 147 aa14□□□□□ -0.17
SSU72-204ENST00000378726 SVIPQ8NHG7 77 aa14□□□□□ -0.17
SSU72-204ENST00000378726 SDHAF1A6NFY7 115 aa14□□□□□ -0.17
SSU72-204ENST00000378726 PMVKQ15126 192 aa14□□□□□ -0.17
SSU72-204ENST00000378726 CFAP126Q5VTH2 177 aa14□□□□□ -0.17
SSU72-204ENST00000378726 SFTA2Q6UW10 78 aa14□□□□□ -0.17
SSU72-204ENST00000378726 CSNK1G2-AS1Q8NCQ2 148 aa14□□□□□ -0.17
SSU72-204ENST00000378726 APOMO95445 188 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 KRTAP24-1Q3LI83 254 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 TRRAPQ9Y4A5 3859 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 TMEM238LA0A1B0GVL6 79 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 A6NJY4 79 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 TSPAN13O95857 204 aa13.99□□□□□ -0.17
SSU72-204ENST00000378726 TMEM263Q8WUH6 116 aaKnown RBP13.99□□□□□ -0.17
SSU72-204ENST00000378726 A0A0J9YY99 117 aa13.98□□□□□ -0.17
SSU72-204ENST00000378726 TSPEAR-AS2P59090 65 aa13.98□□□□□ -0.17
SSU72-204ENST00000378726 SMCPP49901 116 aaPredicted RBP13.98□□□□□ -0.17
SSU72-204ENST00000378726 ATP6V0E2Q8NHE4 81 aa13.98□□□□□ -0.17
SSU72-204ENST00000378726 HERVK_113P61574 105 aa13.97□□□□□ -0.17
SSU72-204ENST00000378726 IL17DQ8TAD2 202 aa13.97□□□□□ -0.17
SSU72-204ENST00000378726 TMEM141Q96I45 108 aa13.97□□□□□ -0.17
SSU72-204ENST00000378726 KIR2DL4Q99706 377 aa13.97□□□□□ -0.17
SSU72-204ENST00000378726 TRBV27A0A0K0K1C4 114 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 FOXI1Q12951 378 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 PAPPA-AS1Q5QFB9 102 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 ZNRF2Q8NHG8 242 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 TRGV1A0A0A0MS02 117 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 RS1O15537 224 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 PSMB2P49721 201 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 Q6ZSN1 163 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 TIMM17AQ99595 171 aa13.96□□□□□ -0.17
SSU72-204ENST00000378726 LOC107984156A0A0G2JMH3 177 aa13.95□□□□□ -0.18
SSU72-204ENST00000378726 TMEM170BQ5T4T1 132 aa13.95□□□□□ -0.18
SSU72-204ENST00000378726 ARL17AQ8IVW1 177 aa13.95□□□□□ -0.18
SSU72-204ENST00000378726 EDA2RQ9HAV5 297 aa13.95□□□□□ -0.18
SSU72-204ENST00000378726 RHODO00212 210 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms