RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 HRNRQ86YZ3 2850 aaPredicted RBP15.19■□□□□ 0.02
TMEFF1-201ENST00000374879 MED13LQ71F56 2210 aa15.19■□□□□ 0.02
TMEFF1-201ENST00000374879 IGHV1-58A0A0C4DH39 117 aa15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 M0QY20 66 aa15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 C11orf71Q6IPW1 123 aa15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 CITED2Q99967 270 aaPredicted RBP15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 SOCS3O14543 225 aa15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 CXCL5P42830 114 aa15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 DAZ2Q13117 558 aaKnown RBP15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 DAZ4Q86SG3 579 aaKnown RBP15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 DAZ1Q9NQZ3 744 aaKnown RBP15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 DAZ3Q9NR90 486 aaKnown RBP15.18■□□□□ 0.02
TMEFF1-201ENST00000374879 IGKV3-7A0A075B6H7 116 aa15.17■□□□□ 0.02
TMEFF1-201ENST00000374879 TRBV7-1A0A0A6YYK4 115 aa15.17■□□□□ 0.02
TMEFF1-201ENST00000374879 KIR2DL5BQ8NHK3 375 aa15.17■□□□□ 0.02
TMEFF1-201ENST00000374879 RNASE13Q5GAN3 156 aaKnown RBP15.16■□□□□ 0.02
TMEFF1-201ENST00000374879 MRPS36P82909 103 aaKnown RBP15.15■□□□□ 0.02
TMEFF1-201ENST00000374879 FAM104AQ969W3 186 aa15.15■□□□□ 0.02
TMEFF1-201ENST00000374879 PEMTQ9UBM1 199 aa15.15■□□□□ 0.02
TMEFF1-201ENST00000374879 KLK9Q2XQG4 91 aa15.15■□□□□ 0.02
TMEFF1-201ENST00000374879 KLK9Q9UKQ9 250 aa15.15■□□□□ 0.02
TMEFF1-201ENST00000374879 ZFP36P26651 326 aaKnown RBP15.14■□□□□ 0.01
TMEFF1-201ENST00000374879 UNQ9165/PRO28630Q6UXU0 137 aa15.14■□□□□ 0.01
TMEFF1-201ENST00000374879 VPS13CQ709C8 3753 aa15.14■□□□□ 0.01
TMEFF1-201ENST00000374879 VSIG2Q96IQ7 327 aa15.14■□□□□ 0.01
TMEFF1-201ENST00000374879 TRACP01848 142 aa15.13■□□□□ 0.01
TMEFF1-201ENST00000374879 CD28P10747 220 aa15.13■□□□□ 0.01
TMEFF1-201ENST00000374879 HIST1H4AP62805 103 aaKnown RBP15.13■□□□□ 0.01
TMEFF1-201ENST00000374879 PF4V1P10720 104 aa15.13■□□□□ 0.01
TMEFF1-201ENST00000374879 TIRAPP58753 221 aa15.13■□□□□ 0.01
TMEFF1-201ENST00000374879 DPH3Q96FX2 82 aa15.13■□□□□ 0.01
TMEFF1-201ENST00000374879 COX7A2LO14548 114 aa15.12■□□□□ 0.01
TMEFF1-201ENST00000374879 KLRB1Q12918 225 aa15.12■□□□□ 0.01
TMEFF1-201ENST00000374879 MINOS1Q5TGZ0 78 aa15.12■□□□□ 0.01
TMEFF1-201ENST00000374879 MINOS1-NBL1R4GNA1 71 aa15.12■□□□□ 0.01
TMEFF1-201ENST00000374879 ATOX1O00244 68 aa15.12■□□□□ 0.01
TMEFF1-201ENST00000374879 C22orf24Q9Y442 160 aa15.12■□□□□ 0.01
TMEFF1-201ENST00000374879 BAALC-AS2P0C853 105 aa15.11■□□□□ 0.01
TMEFF1-201ENST00000374879 KLLNB2CW77 178 aa15.1■□□□□ 0.01
TMEFF1-201ENST00000374879 OXTP01178 125 aa15.1■□□□□ 0.01
TMEFF1-201ENST00000374879 NACAE9PAV3 2078 aa15.1■□□□□ 0.01
TMEFF1-201ENST00000374879 COL6A6A6NMZ7 2263 aa15.09■□□□□ 0.01
TMEFF1-201ENST00000374879 TRAV13-1A0A0B4J241 112 aa15.09■□□□□ 0.01
TMEFF1-201ENST00000374879 AKAP6Q13023 2319 aa15.09■□□□□ 0.01
TMEFF1-201ENST00000374879 BEAN1Q3B7T3 259 aa15.09■□□□□ 0.01
TMEFF1-201ENST00000374879 Q8N2B8 174 aa15.09■□□□□ 0.01
TMEFF1-201ENST00000374879 SIRPDQ9H106 197 aa15.09■□□□□ 0.01
TMEFF1-201ENST00000374879 RS1O15537 224 aa15.08■□□□□ 0
TMEFF1-201ENST00000374879 TRBV12-3P01733 135 aa15.08■□□□□ 0
TMEFF1-201ENST00000374879 C4orf26Q17RF5 130 aa15.08■□□□□ 0
TMEFF1-201ENST00000374879 MAP1AP78559 2803 aaPredicted RBP15.08■□□□□ 0
TMEFF1-201ENST00000374879 A0A1W2PPR1 153 aa15.08■□□□□ 0
TMEFF1-201ENST00000374879 SPTBN1Q01082 2364 aaKnown RBP15.07■□□□□ 0
TMEFF1-201ENST00000374879 SPTBN4Q9H254 2564 aa15.07■□□□□ 0
TMEFF1-201ENST00000374879 IGHV3OR16-10A0A075B7F0 116 aa15.07■□□□□ 0
TMEFF1-201ENST00000374879 DSCR8Q96T75 97 aa15.07■□□□□ 0
TMEFF1-201ENST00000374879 TIMM17BO60830 172 aa15.06■□□□□ 0
TMEFF1-201ENST00000374879 C9orf85Q96MD7 179 aa15.06■□□□□ 0
TMEFF1-201ENST00000374879 PYGO1Q9Y3Y4 419 aa15.06■□□□□ 0
TMEFF1-201ENST00000374879 CELSR1Q9NYQ6 3014 aa15.06■□□□□ 0
TMEFF1-201ENST00000374879 CHD8Q9HCK8 2581 aa15.06■□□□□ 0
TMEFF1-201ENST00000374879 IGHV3-16A0A0C4DH30 117 aa15.05■□□□□ 0
TMEFF1-201ENST00000374879 UCNP55089 124 aa15.05■□□□□ 0
TMEFF1-201ENST00000374879 A0A0U1RRA0 63 aa15.04■□□□□ -0
TMEFF1-201ENST00000374879 TMEM258P61165 79 aa15.04■□□□□ -0
TMEFF1-201ENST00000374879 RPL18AQ02543 176 aaKnown RBP15.04■□□□□ -0
TMEFF1-201ENST00000374879 LINC00308Q8TCZ7 52 aa15.04■□□□□ -0
TMEFF1-201ENST00000374879 TINCRA0A1B0GVN0 87 aa15.04■□□□□ -0
TMEFF1-201ENST00000374879 FAM218AQ96MZ4 157 aa15.04■□□□□ -0
TMEFF1-201ENST00000374879 NCOR2Q9Y618 2525 aa15.03■□□□□ -0
TMEFF1-201ENST00000374879 SAA4P35542 130 aa15.03■□□□□ -0
TMEFF1-201ENST00000374879 HRCT1Q6UXD1 115 aa15.02■□□□□ -0
TMEFF1-201ENST00000374879 UPK3BQ9BT76 320 aa15.02■□□□□ -0
TMEFF1-201ENST00000374879 SPTAN1Q13813 2472 aaKnown RBP15.02■□□□□ -0
TMEFF1-201ENST00000374879 IGKV3D-7A0A0C4DH55 119 aa15.01□□□□□ -0.01
TMEFF1-201ENST00000374879 F5H768 121 aa15.01□□□□□ -0.01
TMEFF1-201ENST00000374879 IGHG2P01859 326 aa15.01□□□□□ -0.01
TMEFF1-201ENST00000374879 ZNF625Q96I27 306 aaPredicted RBP15.01□□□□□ -0.01
TMEFF1-201ENST00000374879 TRAV12-2A0A075B6T6 113 aa15□□□□□ -0.01
TMEFF1-201ENST00000374879 INAFM2P0DMQ5 153 aa15□□□□□ -0.01
TMEFF1-201ENST00000374879 Q5XG85 94 aa15□□□□□ -0.01
TMEFF1-201ENST00000374879 Q9HAA7 133 aa15□□□□□ -0.01
TMEFF1-201ENST00000374879 SERP2Q8N6R1 65 aa14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 NDUFA4O00483 81 aa14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 NDUFA1O15239 70 aa14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 CIRBPQ14011 172 aaKnown RBP14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 SOSTDC1Q6X4U4 206 aa14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 RNF152Q8N8N0 203 aa14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 CDKN2A-AS1Q9UH64 79 aa14.99□□□□□ -0.01
TMEFF1-201ENST00000374879 A0A087WVE0 104 aa14.98□□□□□ -0.01
TMEFF1-201ENST00000374879 IGHV3-73A0A0B4J1V6 119 aa14.98□□□□□ -0.01
TMEFF1-201ENST00000374879 BPESC1Q9GZL8 116 aa14.98□□□□□ -0.01
TMEFF1-201ENST00000374879 RHPN1-AS1Q9BWJ2 59 aa14.97□□□□□ -0.01
TMEFF1-201ENST00000374879 IGKV3-20P01619 116 aa14.97□□□□□ -0.01
TMEFF1-201ENST00000374879 FAM222AQ5U5X8 452 aa14.97□□□□□ -0.01
TMEFF1-201ENST00000374879 HIVEP3Q5T1R4 2406 aa14.97□□□□□ -0.01
TMEFF1-201ENST00000374879 PROK1P58294 105 aa14.96□□□□□ -0.01
TMEFF1-201ENST00000374879 MALP21145 153 aa14.96□□□□□ -0.02
TMEFF1-201ENST00000374879 LMO4P61968 165 aa14.96□□□□□ -0.02
TMEFF1-201ENST00000374879 Q9H8V8 135 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms