RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
CTSA-204ENST00000372484 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
CTSA-204ENST00000372484 A6NDN8 102 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 CRLF1O75462 422 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 ZNF479Q96JC4 524 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 PRADC1Q9BSG0 188 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 NPSP0C0P6 89 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 CSNK1G2-AS1Q8NCQ2 148 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 C16orf74Q96GX8 76 aa12.86□□□□□ -0.35
CTSA-204ENST00000372484 IGLV4-3A0A075B6K6 122 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 IGHV3-38A0A0C4DH36 116 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 MYMXA0A1B0GTQ4 84 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 HERVK_113P61574 105 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 DAZ2Q13117 558 aaKnown RBP12.85□□□□□ -0.35
CTSA-204ENST00000372484 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 PHLDA1Q8WV24 401 aaPredicted RBP12.85□□□□□ -0.35
CTSA-204ENST00000372484 VCX2Q9H322 139 aa12.85□□□□□ -0.35
CTSA-204ENST00000372484 GCSHP23434 173 aa12.84□□□□□ -0.35
CTSA-204ENST00000372484 PYGO1Q9Y3Y4 419 aa12.84□□□□□ -0.35
CTSA-204ENST00000372484 TRAV4A0A0B4J268 109 aa12.83□□□□□ -0.35
CTSA-204ENST00000372484 RRN3P1Q2M238 152 aa12.83□□□□□ -0.35
CTSA-204ENST00000372484 PLAC8L1A1L4L8 177 aa12.83□□□□□ -0.36
CTSA-204ENST00000372484 COTL1Q14019 142 aa12.83□□□□□ -0.36
CTSA-204ENST00000372484 CHCHD7Q9BUK0 85 aa12.83□□□□□ -0.36
CTSA-204ENST00000372484 INSL3P51460 131 aa12.82□□□□□ -0.36
CTSA-204ENST00000372484 ATRQ13535 2644 aa12.82□□□□□ -0.36
CTSA-204ENST00000372484 CEMP1Q6PRD7 247 aaPredicted RBP12.82□□□□□ -0.36
CTSA-204ENST00000372484 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
CTSA-204ENST00000372484 TRBV7-3A0A075B6L6 115 aa12.81□□□□□ -0.36
CTSA-204ENST00000372484 VAMP3Q15836 100 aa12.81□□□□□ -0.36
CTSA-204ENST00000372484 C9orf66Q5T8R8 295 aa12.81□□□□□ -0.36
CTSA-204ENST00000372484 SPATA3Q8NHX4 192 aa12.81□□□□□ -0.36
CTSA-204ENST00000372484 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 K7EQD1 137 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
CTSA-204ENST00000372484 TEP1Q99973 2627 aaKnown RBP12.8□□□□□ -0.36
CTSA-204ENST00000372484 TRGV2A0A075B6R0 118 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
CTSA-204ENST00000372484 GAGE12BA1L429 117 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
CTSA-204ENST00000372484 GAGE7O76087 117 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 FXYD2P54710 66 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 CEND1Q8N111 149 aa12.8□□□□□ -0.36
CTSA-204ENST00000372484 TRBV10-1A0A0K0K1A3 114 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 H3BRM9 83 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 K7EP13 123 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
CTSA-204ENST00000372484 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
CTSA-204ENST00000372484 FAM104AQ969W3 186 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 UBE2D4Q9Y2X8 147 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 TAL2Q16559 108 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 AMELXQ99217 191 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 HIST1H4GQ99525 98 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 SPANXA1Q9NS26 97 aa12.79□□□□□ -0.36
CTSA-204ENST00000372484 A0A0J9YXV3 536 aa12.78□□□□□ -0.36
CTSA-204ENST00000372484 CRYBA4P53673 196 aa12.78□□□□□ -0.36
CTSA-204ENST00000372484 CITED1Q99966 193 aa12.78□□□□□ -0.36
CTSA-204ENST00000372484 OVOL2Q9BRP0 275 aa12.78□□□□□ -0.36
CTSA-204ENST00000372484 SCGB1D4Q6XE38 83 aa12.77□□□□□ -0.36
CTSA-204ENST00000372484 FLNBO75369 2602 aaKnown RBP12.77□□□□□ -0.36
CTSA-204ENST00000372484 CCL25O15444 150 aa12.77□□□□□ -0.37
CTSA-204ENST00000372484 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
CTSA-204ENST00000372484 RAB37Q96AX2 223 aa12.76□□□□□ -0.37
CTSA-204ENST00000372484 ZNF22P17026 224 aaPredicted RBP12.76□□□□□ -0.37
CTSA-204ENST00000372484 TMEM223A0PJW6 202 aa12.75□□□□□ -0.37
CTSA-204ENST00000372484 C9orf118A6NHY6 69 aa12.75□□□□□ -0.37
CTSA-204ENST00000372484 SMIM13P0DJ93 91 aa12.75□□□□□ -0.37
CTSA-204ENST00000372484 AMMECR1LQ6DCA0 310 aa12.75□□□□□ -0.37
CTSA-204ENST00000372484 F8P00451 2351 aa12.75□□□□□ -0.37
CTSA-204ENST00000372484 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 TSPEAR-AS2P59090 65 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 GAGE4Q13068 117 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 GAGE5Q13069 117 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
CTSA-204ENST00000372484 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
CTSA-204ENST00000372484 J3QQQ9 107 aa12.74□□□□□ -0.37
CTSA-204ENST00000372484 MRPS36P82909 103 aaKnown RBP12.74□□□□□ -0.37
CTSA-204ENST00000372484 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
CTSA-204ENST00000372484 CIDEAO60543 219 aa12.73□□□□□ -0.37
CTSA-204ENST00000372484 UBE2D3P61077 147 aa12.73□□□□□ -0.37
CTSA-204ENST00000372484 UBE2D2P62837 147 aa12.73□□□□□ -0.37
CTSA-204ENST00000372484 Q6ZUT4 128 aa12.73□□□□□ -0.37
CTSA-204ENST00000372484 TRGV4A0A0C4DH28 118 aa12.73□□□□□ -0.37
CTSA-204ENST00000372484 H3BUT2 72 aa12.73□□□□□ -0.37
CTSA-204ENST00000372484 LGALS3P17931 250 aaKnown RBP12.73□□□□□ -0.37
CTSA-204ENST00000372484 DGAT2L7PQ6IED9 249 aa12.72□□□□□ -0.37
CTSA-204ENST00000372484 NAA38Q9BRA0 125 aaKnown RBP12.72□□□□□ -0.37
CTSA-204ENST00000372484 IGHV3-64A0A075B6Q5 118 aa12.71□□□□□ -0.37
CTSA-204ENST00000372484 TRBV6-4A0A1B0GX49 114 aa12.71□□□□□ -0.37
CTSA-204ENST00000372484 K7ERJ3 54 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms