RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DENND4AQ7Z401 1863 aa16.64■□□□□ 0.25
TM9SF3-201ENST00000371142 IGKV4-1P06312 121 aa16.64■□□□□ 0.25
TM9SF3-201ENST00000371142 LRCOL1A6NCL2 159 aa16.64■□□□□ 0.25
TM9SF3-201ENST00000371142 ZFHX2Q9C0A1 2572 aaPredicted RBP16.64■□□□□ 0.25
TM9SF3-201ENST00000371142 K7EQG2 157 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 IGLC6P0CF74 106 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 TRAV23DV6A0A075B6W5 121 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 INAFM1C9JVW0 142 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 ODF3Q96PU9 254 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 G3V4G9 280 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 C2orf16Q68DN1 1984 aa16.63■□□□□ 0.25
TM9SF3-201ENST00000371142 C14orf177Q52M58 125 aa16.62■□□□□ 0.25
TM9SF3-201ENST00000371142 UPK3BQ9BT76 320 aa16.62■□□□□ 0.25
TM9SF3-201ENST00000371142 LINC00574Q9H8X3 128 aa16.62■□□□□ 0.25
TM9SF3-201ENST00000371142 LINC00482Q8N8I6 264 aa16.62■□□□□ 0.25
TM9SF3-201ENST00000371142 NEXN-AS1Q8NBZ9 246 aa16.62■□□□□ 0.25
TM9SF3-201ENST00000371142 CDKN2A-AS1Q9UH64 79 aa16.61■□□□□ 0.25
TM9SF3-201ENST00000371142 DEFB131BA0A096LNP1 70 aa16.61■□□□□ 0.25
TM9SF3-201ENST00000371142 J3KT08 172 aa16.61■□□□□ 0.25
TM9SF3-201ENST00000371142 LRRC75A-AS1Q8N1F1 130 aa16.61■□□□□ 0.25
TM9SF3-201ENST00000371142 FAM19A1Q7Z5A9 133 aa16.61■□□□□ 0.25
TM9SF3-201ENST00000371142 LYRM9A8MSI8 78 aa16.6■□□□□ 0.25
TM9SF3-201ENST00000371142 BPY2O14599 106 aa16.6■□□□□ 0.25
TM9SF3-201ENST00000371142 NDUFC2O95298 119 aa16.6■□□□□ 0.25
TM9SF3-201ENST00000371142 ZNF106Q9H2Y7 1883 aaKnown RBP16.6■□□□□ 0.25
TM9SF3-201ENST00000371142 SLPIP03973 132 aa16.6■□□□□ 0.25
TM9SF3-201ENST00000371142 C10orf99Q6UWK7 81 aa16.59■□□□□ 0.25
TM9SF3-201ENST00000371142 PDE6GP18545 87 aa16.59■□□□□ 0.25
TM9SF3-201ENST00000371142 TNCP24821 2201 aa16.59■□□□□ 0.25
TM9SF3-201ENST00000371142 TMEM131Q92545 1883 aa16.59■□□□□ 0.25
TM9SF3-201ENST00000371142 IL17DQ8TAD2 202 aa16.59■□□□□ 0.25
TM9SF3-201ENST00000371142 ZNF295-AS1Q8N0V1 137 aa16.58■□□□□ 0.24
TM9SF3-201ENST00000371142 A0A087WZ39 114 aa16.58■□□□□ 0.24
TM9SF3-201ENST00000371142 SEC61GP60059 68 aa16.57■□□□□ 0.24
TM9SF3-201ENST00000371142 PROK1P58294 105 aa16.57■□□□□ 0.24
TM9SF3-201ENST00000371142 HILS1P60008 231 aa16.57■□□□□ 0.24
TM9SF3-201ENST00000371142 SCXQ7RTU7 201 aa16.57■□□□□ 0.24
TM9SF3-201ENST00000371142 MLST8Q9BVC4 326 aa16.57■□□□□ 0.24
TM9SF3-201ENST00000371142 TP73-AS1Q9UF72 201 aa16.57■□□□□ 0.24
TM9SF3-201ENST00000371142 IGLV4-3A0A075B6K6 122 aa16.56■□□□□ 0.24
TM9SF3-201ENST00000371142 CFAP126Q5VTH2 177 aa16.56■□□□□ 0.24
TM9SF3-201ENST00000371142 TMEM223A0PJW6 202 aa16.56■□□□□ 0.24
TM9SF3-201ENST00000371142 SMIM9A6NGZ8 99 aa16.56■□□□□ 0.24
TM9SF3-201ENST00000371142 FAM208BQ5VWN6 2430 aa16.56■□□□□ 0.24
TM9SF3-201ENST00000371142 PIK3CD-AS1Q5SR53 167 aa16.55■□□□□ 0.24
TM9SF3-201ENST00000371142 TEX49A0A1B0GTD5 131 aa16.55■□□□□ 0.24
TM9SF3-201ENST00000371142 FAM19A5Q7Z5A7 132 aaPredicted RBP16.55■□□□□ 0.24
TM9SF3-201ENST00000371142 LINC00643Q86TS7 51 aa16.55■□□□□ 0.24
TM9SF3-201ENST00000371142 ZNF22P17026 224 aaPredicted RBP16.54■□□□□ 0.24
TM9SF3-201ENST00000371142 SDIM1Q6ZPB5 146 aa16.54■□□□□ 0.24
TM9SF3-201ENST00000371142 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.54■□□□□ 0.24
TM9SF3-201ENST00000371142 ZFAND3Q9H8U3 227 aa16.54■□□□□ 0.24
TM9SF3-201ENST00000371142 CRIP3Q6Q6R5 217 aa16.53■□□□□ 0.24
TM9SF3-201ENST00000371142 Q6ZSV7 163 aa16.53■□□□□ 0.24
TM9SF3-201ENST00000371142 XAGE1AQ9HD64 81 aa16.53■□□□□ 0.24
TM9SF3-201ENST00000371142 EIF4EBP1Q13541 118 aaPredicted RBP16.53■□□□□ 0.24
TM9SF3-201ENST00000371142 CRIP1P50238 77 aa16.53■□□□□ 0.24
TM9SF3-201ENST00000371142 H7C423 109 aa16.52■□□□□ 0.24
TM9SF3-201ENST00000371142 DSCAML1Q8TD84 2053 aa16.51■□□□□ 0.23
TM9SF3-201ENST00000371142 DCANP1Q8TF63 244 aa16.51■□□□□ 0.23
TM9SF3-201ENST00000371142 LY6LH3BQJ8 138 aa16.51■□□□□ 0.23
TM9SF3-201ENST00000371142 FREM1Q5H8C1 2179 aa16.51■□□□□ 0.23
TM9SF3-201ENST00000371142 TRBV6-8A0A0A6YYG3 113 aa16.51■□□□□ 0.23
TM9SF3-201ENST00000371142 M0QY20 66 aa16.5■□□□□ 0.23
TM9SF3-201ENST00000371142 Q8N976 141 aa16.5■□□□□ 0.23
TM9SF3-201ENST00000371142 LINC00308Q8TCZ7 52 aa16.49■□□□□ 0.23
TM9SF3-201ENST00000371142 MAPKAPK5-AS1Q8N8E1 139 aa16.49■□□□□ 0.23
TM9SF3-201ENST00000371142 KIAA1549LQ6ZVL6 1849 aa16.49■□□□□ 0.23
TM9SF3-201ENST00000371142 NCOA6Q14686 2063 aaPredicted RBP16.49■□□□□ 0.23
TM9SF3-201ENST00000371142 SVIPQ8NHG7 77 aa16.48■□□□□ 0.23
TM9SF3-201ENST00000371142 PTPRQQ9UMZ3 2332 aa16.48■□□□□ 0.23
TM9SF3-201ENST00000371142 MBD6Q96DN6 1003 aa16.48■□□□□ 0.23
TM9SF3-201ENST00000371142 CASC2Q6XLA1 102 aa16.47■□□□□ 0.23
TM9SF3-201ENST00000371142 RNF185Q96GF1 192 aa16.47■□□□□ 0.23
TM9SF3-201ENST00000371142 BBC3Q96PG8 261 aaPredicted RBP16.47■□□□□ 0.23
TM9SF3-201ENST00000371142 BRK1Q8WUW1 75 aa16.46■□□□□ 0.23
TM9SF3-201ENST00000371142 IBA57-AS1B1ANH7 110 aa16.46■□□□□ 0.23
TM9SF3-201ENST00000371142 ENHOQ6UWT2 76 aa16.46■□□□□ 0.23
TM9SF3-201ENST00000371142 EBI3Q14213 229 aa16.46■□□□□ 0.22
TM9SF3-201ENST00000371142 A8MZ25 164 aa16.45■□□□□ 0.22
TM9SF3-201ENST00000371142 MT-ATP8P03928 68 aa16.45■□□□□ 0.22
TM9SF3-201ENST00000371142 MIFP14174 115 aa16.45■□□□□ 0.22
TM9SF3-201ENST00000371142 TRIAP1O43715 76 aa16.44■□□□□ 0.22
TM9SF3-201ENST00000371142 C11orf71Q6IPW1 123 aa16.44■□□□□ 0.22
TM9SF3-201ENST00000371142 C20orf197Q8N268 126 aa16.44■□□□□ 0.22
TM9SF3-201ENST00000371142 WFDC10BQ8IUB3 73 aa16.44■□□□□ 0.22
TM9SF3-201ENST00000371142 MUC6Q6W4X9 2439 aa16.44■□□□□ 0.22
TM9SF3-201ENST00000371142 TECTAO75443 2155 aa16.44■□□□□ 0.22
TM9SF3-201ENST00000371142 TRBV6-4A0A1B0GX49 114 aa16.43■□□□□ 0.22
TM9SF3-201ENST00000371142 LINC00526Q96FQ7 95 aa16.43■□□□□ 0.22
TM9SF3-201ENST00000371142 C18orf65Q6ZTR6 163 aa16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 MPLKIPQ8TAP9 179 aa16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 SPANXB1Q9NS25 103 aaPredicted RBP16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 WFDC10AQ9H1F0 79 aa16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 USP17L23D6RBM5 183 aa16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 IGKV2-28A0A075B6P5 120 aa16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 IGKV2D-28P01615 120 aa16.42■□□□□ 0.22
TM9SF3-201ENST00000371142 IGLV2-18A0A075B6J9 118 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 C6orf99Q4VX62 202 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms