RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CAMK2N2Q96S95 79 aa8.91□□□□□ -0.98
DEPDC1-201ENST00000370966 OPRPNQ99935 248 aaPredicted RBP8.91□□□□□ -0.98
DEPDC1-201ENST00000370966 IGLV10-54A0A075B6I4 117 aa8.9□□□□□ -0.98
DEPDC1-201ENST00000370966 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.98
DEPDC1-201ENST00000370966 RNF185Q96GF1 192 aa8.9□□□□□ -0.98
DEPDC1-201ENST00000370966 TM2D2Q9BX73 214 aa8.9□□□□□ -0.98
DEPDC1-201ENST00000370966 NDUFA11Q86Y39 141 aa8.9□□□□□ -0.99
DEPDC1-201ENST00000370966 Q6ZUT4 128 aa8.89□□□□□ -0.99
DEPDC1-201ENST00000370966 DAND5Q8N907 189 aa8.89□□□□□ -0.99
DEPDC1-201ENST00000370966 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
DEPDC1-201ENST00000370966 FOXI1Q12951 378 aa8.89□□□□□ -0.99
DEPDC1-201ENST00000370966 DEFB135Q30KP9 77 aa8.89□□□□□ -0.99
DEPDC1-201ENST00000370966 PSMB8P28062 276 aa8.88□□□□□ -0.99
DEPDC1-201ENST00000370966 TRBV6-5A0A0K0K1A5 114 aa8.88□□□□□ -0.99
DEPDC1-201ENST00000370966 H3BQ85 93 aa8.88□□□□□ -0.99
DEPDC1-201ENST00000370966 CCL18P55774 89 aa8.88□□□□□ -0.99
DEPDC1-201ENST00000370966 Q9HAA7 133 aa8.88□□□□□ -0.99
DEPDC1-201ENST00000370966 MIAQ16674 131 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 Q6ZTI0 123 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 ABCA12Q86UK0 2595 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 M0QY20 66 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 NDUFA1O15239 70 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 A0A0J9YXY3 114 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 PSMG3-AS1Q96PY0 264 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 ESM1Q9NQ30 184 aa8.87□□□□□ -0.99
DEPDC1-201ENST00000370966 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 ZFYVE26Q68DK2 2539 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 IGHV4-4A0A075B6R2 117 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 P0DMU3 169 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 FAM231AP0DMU4 169 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 FAM231CP0DMU5 169 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 SPAG11BQ08648 103 aa8.86□□□□□ -0.99
DEPDC1-201ENST00000370966 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 JMJD7-PLA2G4BH0Y9G9 81 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 IGHV3-30P01768 117 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 IGHV3-33P01772 117 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 IGHV3-30-5P0DP03 117 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 Q6ZSV7 163 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 KLLNB2CW77 178 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 ZNF22P17026 224 aaPredicted RBP8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 WFDC11Q8NEX6 87 aa8.85□□□□□ -0.99
DEPDC1-201ENST00000370966 IGLV1-40P01703 118 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 H7C423 109 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 NRACQ8N912 160 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 IGKV2D-26A0A0A0MRZ7 120 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 CDKN2A-AS1Q9UH64 79 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 SETD2Q9BYW2 2564 aaPredicted RBP8.84□□□□□ -0.99
DEPDC1-201ENST00000370966 PRRC2AP48634 2157 aaKnown RBP8.84□□□□□ -1
DEPDC1-201ENST00000370966 C11orf21Q9P2W6 132 aa8.83□□□□□ -1
DEPDC1-201ENST00000370966 LECT2O14960 151 aa8.83□□□□□ -1
DEPDC1-201ENST00000370966 LINC00467Q9BRT7 94 aa8.83□□□□□ -1
DEPDC1-201ENST00000370966 SVIPQ8NHG7 77 aa8.83□□□□□ -1
DEPDC1-201ENST00000370966 MRAPQ8TCY5 172 aa8.83□□□□□ -1
DEPDC1-201ENST00000370966 TMEM223A0PJW6 202 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 MRPS12O15235 138 aaKnown RBP8.82□□□□□ -1
DEPDC1-201ENST00000370966 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
DEPDC1-201ENST00000370966 UBE2BP63146 152 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 C10orf99Q6UWK7 81 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 RNF183Q96D59 192 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 TRACP01848 142 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 CFAP126Q5VTH2 177 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 LYRM9A8MSI8 78 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 TIRAPP58753 221 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 CDSNQ15517 529 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 CLEC2BQ92478 149 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 DOPEY1Q5JWR5 2465 aa8.82□□□□□ -1
DEPDC1-201ENST00000370966 DEFB4AO15263 64 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 ZNF702PQ9H963 129 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 POLR2KP53803 58 aaKnown RBP8.81□□□□□ -1
DEPDC1-201ENST00000370966 HIST2H2BDQ6DRA6 164 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 CPAMD8Q8IZJ3 1885 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 TCL1BO95988 128 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 MAPKAPK5-AS1Q8N8E1 139 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 EML5Q05BV3 1969 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
DEPDC1-201ENST00000370966 RS1O15537 224 aa8.8□□□□□ -1
DEPDC1-201ENST00000370966 RPL18AQ02543 176 aaKnown RBP8.8□□□□□ -1
DEPDC1-201ENST00000370966 PRR9Q5T870 116 aa8.8□□□□□ -1
DEPDC1-201ENST00000370966 LINC00310P59036 64 aa8.8□□□□□ -1
DEPDC1-201ENST00000370966 PTH2Q96A98 100 aa8.8□□□□□ -1
DEPDC1-201ENST00000370966 TP73-AS1Q9UF72 201 aa8.8□□□□□ -1
DEPDC1-201ENST00000370966 DCANP1Q8TF63 244 aa8.8□□□□□ -1
DEPDC1-201ENST00000370966 TNRC6BQ9UPQ9 1833 aaKnown RBP8.79□□□□□ -1
DEPDC1-201ENST00000370966 FN1P02751 2386 aaKnown RBP8.79□□□□□ -1
DEPDC1-201ENST00000370966 FAM222AQ5U5X8 452 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms