RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CFC1P0CG37 223 aa9.22□□□□□ -0.93
PTPRK-203ENST00000368207 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
PTPRK-203ENST00000368207 FXYD2P54710 66 aa9.22□□□□□ -0.93
PTPRK-203ENST00000368207 PRUNE2Q8WUY3 3088 aa9.22□□□□□ -0.93
PTPRK-203ENST00000368207 TRAV12-1A0A0B4J245 112 aa9.21□□□□□ -0.93
PTPRK-203ENST00000368207 LINC01006Q8NI28 216 aa9.21□□□□□ -0.93
PTPRK-203ENST00000368207 LY6G6DO95868 133 aa9.21□□□□□ -0.93
PTPRK-203ENST00000368207 YPEL4Q96NS1 127 aa9.21□□□□□ -0.93
PTPRK-203ENST00000368207 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.93
PTPRK-203ENST00000368207 A4D1N5 150 aa9.21□□□□□ -0.94
PTPRK-203ENST00000368207 NDUFA11Q86Y39 141 aa9.21□□□□□ -0.94
PTPRK-203ENST00000368207 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
PTPRK-203ENST00000368207 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
PTPRK-203ENST00000368207 LURAP1LQ8IV03 231 aa9.21□□□□□ -0.94
PTPRK-203ENST00000368207 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 LINC00482Q8N8I6 264 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 RMI2Q96E14 147 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 ODF3Q96PU9 254 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 COL4A2P08572 1712 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 C11orf21Q9P2W6 132 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
PTPRK-203ENST00000368207 COX7A2LO14548 114 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 IGLV1-40P01703 118 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 PRR9Q5T870 116 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 E9PLD3 99 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 F8WEM9 126 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 CARD19Q96LW7 228 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 Q6ZUT4 128 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 F8W1H4 67 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
PTPRK-203ENST00000368207 PRM2P04554 102 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 SMR3AQ99954 134 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 PLA2G2AP14555 144 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 WFDC10AQ9H1F0 79 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 HERV-K104P63124 156 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 FAM222AQ5U5X8 452 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 PPDPFLQ8WWR9 84 aa9.18□□□□□ -0.94
PTPRK-203ENST00000368207 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 PRSS47A8MTI9 375 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 EDN2P20800 178 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 TP73-AS1Q9UF72 201 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 IGLL5B9A064 214 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 CCL18P55774 89 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 ADAMTS20P59510 1910 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 PROK1P58294 105 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 COX7B2Q8TF08 81 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
PTPRK-203ENST00000368207 SPATA12Q7Z6I5 190 aa9.16□□□□□ -0.94
PTPRK-203ENST00000368207 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-203ENST00000368207 BBC3Q96PG8 261 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-203ENST00000368207 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-203ENST00000368207 SOCS3O14543 225 aa9.16□□□□□ -0.94
PTPRK-203ENST00000368207 SH2D6Q7Z4S9 175 aa9.16□□□□□ -0.94
PTPRK-203ENST00000368207 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
PTPRK-203ENST00000368207 INAFM2P0DMQ5 153 aa9.16□□□□□ -0.94
PTPRK-203ENST00000368207 TRAV26-1A0A087WT03 109 aa9.15□□□□□ -0.94
PTPRK-203ENST00000368207 IFITM1P13164 125 aa9.15□□□□□ -0.95
PTPRK-203ENST00000368207 RNASE3P12724 160 aaKnown RBP9.15□□□□□ -0.95
PTPRK-203ENST00000368207 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
PTPRK-203ENST00000368207 HIGD1BQ9P298 99 aa9.14□□□□□ -0.95
PTPRK-203ENST00000368207 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 GAS8-AS1O95177 125 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 HILS1P60008 231 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 IGHV4-4A0A075B6R2 117 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 M0QY20 66 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 UNC80Q8N2C7 3258 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
PTPRK-203ENST00000368207 TNRC6BQ9UPQ9 1833 aaKnown RBP9.13□□□□□ -0.95
PTPRK-203ENST00000368207 CFAP126Q5VTH2 177 aa9.12□□□□□ -0.95
PTPRK-203ENST00000368207 TAX1BP3O14907 124 aa9.12□□□□□ -0.95
PTPRK-203ENST00000368207 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
PTPRK-203ENST00000368207 FAM110AQ9BQ89 295 aa9.12□□□□□ -0.95
PTPRK-203ENST00000368207 MRPS12O15235 138 aaKnown RBP9.12□□□□□ -0.95
PTPRK-203ENST00000368207 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
PTPRK-203ENST00000368207 KLLNB2CW77 178 aa9.12□□□□□ -0.95
PTPRK-203ENST00000368207 SPAG11BQ08648 103 aa9.12□□□□□ -0.95
PTPRK-203ENST00000368207 HECTD1Q9ULT8 2610 aa9.11□□□□□ -0.95
PTPRK-203ENST00000368207 MIR7-3HGQ8N6C7 128 aa9.11□□□□□ -0.95
PTPRK-203ENST00000368207 UBE2BP63146 152 aa9.11□□□□□ -0.95
PTPRK-203ENST00000368207 CDKN2A-AS1Q9UH64 79 aa9.11□□□□□ -0.95
PTPRK-203ENST00000368207 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
PTPRK-203ENST00000368207 HAMPP81172 84 aa9.1□□□□□ -0.95
PTPRK-203ENST00000368207 IGLV4-3A0A075B6K6 122 aa9.09□□□□□ -0.95
PTPRK-203ENST00000368207 LINC00269Q8N2A0 174 aa9.09□□□□□ -0.95
PTPRK-203ENST00000368207 Q8N976 141 aa9.09□□□□□ -0.95
PTPRK-203ENST00000368207 C11orf45Q8TAV5 145 aa9.09□□□□□ -0.95
PTPRK-203ENST00000368207 U3KQK5 164 aa9.09□□□□□ -0.95
PTPRK-203ENST00000368207 IGKV2D-26A0A0A0MRZ7 120 aa9.09□□□□□ -0.95
PTPRK-203ENST00000368207 NRACQ8N912 160 aa9.08□□□□□ -0.96
PTPRK-203ENST00000368207 DEFB105AQ8NG35 78 aa9.08□□□□□ -0.96
PTPRK-203ENST00000368207 CENPEQ02224 2701 aa9.08□□□□□ -0.96
PTPRK-203ENST00000368207 NDUFA1O15239 70 aa9.08□□□□□ -0.96
PTPRK-203ENST00000368207 WFDC2Q14508 124 aa9.08□□□□□ -0.96
PTPRK-203ENST00000368207 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms