RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 ZNF56Q15929 161 aa11.99□□□□□ -0.49
IFT140-201ENST00000361339 DEFB136Q30KP8 78 aa11.99□□□□□ -0.49
IFT140-201ENST00000361339 SBSPONQ8IVN8 264 aa11.99□□□□□ -0.49
IFT140-201ENST00000361339 LINC01620Q4KN68 170 aa11.98□□□□□ -0.49
IFT140-201ENST00000361339 LENEPQ9Y5L5 61 aa11.98□□□□□ -0.49
IFT140-201ENST00000361339 ODF3Q96PU9 254 aa11.98□□□□□ -0.49
IFT140-201ENST00000361339 PRM2P04554 102 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 CHD6Q8TD26 2715 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 PRRC2AP48634 2157 aaKnown RBP11.97□□□□□ -0.49
IFT140-201ENST00000361339 IGHV4OR15-8A0A075B7B6 117 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 A0A087WW49 117 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 C2orf82Q6UX34 121 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 LINC01356Q8N9X3 169 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
IFT140-201ENST00000361339 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.5
IFT140-201ENST00000361339 CLEC2BQ92478 149 aa11.96□□□□□ -0.5
IFT140-201ENST00000361339 SPXQ9BT56 116 aa11.96□□□□□ -0.5
IFT140-201ENST00000361339 LINC00315P59091 139 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 SPINK13Q1W4C9 94 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 SDHAF1A6NFY7 115 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 KLLNB2CW77 178 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 BRI3O95415 125 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 TMEM263Q8WUH6 116 aaKnown RBP11.95□□□□□ -0.5
IFT140-201ENST00000361339 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
IFT140-201ENST00000361339 TRIAP1O43715 76 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 ATXN8Q156A1 80 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 H3BMM0 161 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 UBE2WQ96B02 151 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 A0A0J9YXV3 536 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 CR1P17927 2039 aa11.94□□□□□ -0.5
IFT140-201ENST00000361339 SUMO4Q6EEV6 95 aa11.93□□□□□ -0.5
IFT140-201ENST00000361339 ITPR3Q14573 2671 aa11.93□□□□□ -0.5
IFT140-201ENST00000361339 A8MZ25 164 aa11.93□□□□□ -0.5
IFT140-201ENST00000361339 AMELXQ99217 191 aa11.93□□□□□ -0.5
IFT140-201ENST00000361339 HTN1P15515 57 aa11.92□□□□□ -0.5
IFT140-201ENST00000361339 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
IFT140-201ENST00000361339 SLURP1P55000 103 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 ZNF702PQ9H963 129 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 ACANP16112 2415 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 PAPPA-AS1Q5QFB9 102 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 K7EMT4 169 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 DAND5Q8N907 189 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 FAM110AQ9BQ89 295 aa11.91□□□□□ -0.5
IFT140-201ENST00000361339 NACAE9PAV3 2078 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.5
IFT140-201ENST00000361339 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 A0A0J9YX75 114 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 A0A0U1RRA0 63 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 KNCNA6PVL3 124 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 ID1P41134 155 aa11.9□□□□□ -0.5
IFT140-201ENST00000361339 CEMP1Q6PRD7 247 aaPredicted RBP11.89□□□□□ -0.51
IFT140-201ENST00000361339 PPDPFQ9H3Y8 114 aa11.89□□□□□ -0.51
IFT140-201ENST00000361339 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
IFT140-201ENST00000361339 TENM4Q6N022 2769 aa11.89□□□□□ -0.51
IFT140-201ENST00000361339 VCYO14598 125 aa11.89□□□□□ -0.51
IFT140-201ENST00000361339 RBMY1A1P0DJD3 496 aaKnown RBP11.89□□□□□ -0.51
IFT140-201ENST00000361339 RBMY1CP0DJD4 496 aa11.89□□□□□ -0.51
IFT140-201ENST00000361339 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
IFT140-201ENST00000361339 ZNF876PQ49A33 203 aa11.89□□□□□ -0.51
IFT140-201ENST00000361339 FLNAP21333 2647 aaKnown RBP11.89□□□□□ -0.51
IFT140-201ENST00000361339 K7EQG2 157 aa11.88□□□□□ -0.51
IFT140-201ENST00000361339 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
IFT140-201ENST00000361339 IGHV3-73A0A0B4J1V6 119 aa11.88□□□□□ -0.51
IFT140-201ENST00000361339 H7C423 109 aa11.88□□□□□ -0.51
IFT140-201ENST00000361339 LGALS9O00182 355 aa11.88□□□□□ -0.51
IFT140-201ENST00000361339 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
IFT140-201ENST00000361339 MTORP42345 2549 aa11.87□□□□□ -0.51
IFT140-201ENST00000361339 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
IFT140-201ENST00000361339 DSCR9P59020 149 aa11.87□□□□□ -0.51
IFT140-201ENST00000361339 ZNF843Q8N446 348 aa11.87□□□□□ -0.51
IFT140-201ENST00000361339 NXPH4O95158 308 aa11.86□□□□□ -0.51
IFT140-201ENST00000361339 Q6YL49 198 aa11.86□□□□□ -0.51
IFT140-201ENST00000361339 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
IFT140-201ENST00000361339 ADAMTSL4-AS1Q5T5F5 129 aa11.86□□□□□ -0.51
IFT140-201ENST00000361339 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
IFT140-201ENST00000361339 A0A0J9YXY3 114 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 TMEM223A0PJW6 202 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 Q9UF83 564 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 MED14OSP0DP75 135 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 PROK1P58294 105 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 SNRPD3P62318 126 aaKnown RBP11.85□□□□□ -0.51
IFT140-201ENST00000361339 TMEM141Q96I45 108 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 LEPROTO15243 131 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 Q96MF0 132 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 ICOSQ9Y6W8 199 aa11.85□□□□□ -0.51
IFT140-201ENST00000361339 TRGV11A0A075B6L2 103 aa11.84□□□□□ -0.51
IFT140-201ENST00000361339 P0DMU3 169 aa11.84□□□□□ -0.51
IFT140-201ENST00000361339 FAM231AP0DMU4 169 aa11.84□□□□□ -0.51
IFT140-201ENST00000361339 FAM231CP0DMU5 169 aa11.84□□□□□ -0.51
IFT140-201ENST00000361339 A0A0B4J2C4 111 aa11.84□□□□□ -0.51
IFT140-201ENST00000361339 PPP1R17O96001 155 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms