RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 ACANP16112 2415 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 VSIG2Q96IQ7 327 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 ODF3Q96PU9 254 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 GYPEP15421 78 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
SCAF1-201ENST00000360565 TNRC6BQ9UPQ9 1833 aaKnown RBP12.22□□□□□ -0.45
SCAF1-201ENST00000360565 Q6ZUT4 128 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 C3orf56Q8N813 242 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 SOCS3O14543 225 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 HERV-K104P63124 156 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 ICOSQ9Y6W8 199 aa12.22□□□□□ -0.45
SCAF1-201ENST00000360565 ZNF561-AS1K7EIQ3 104 aa12.21□□□□□ -0.45
SCAF1-201ENST00000360565 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
SCAF1-201ENST00000360565 Q6YL49 198 aa12.21□□□□□ -0.45
SCAF1-201ENST00000360565 ESM1Q9NQ30 184 aa12.21□□□□□ -0.45
SCAF1-201ENST00000360565 ATP6V0E2Q8NHE4 81 aa12.21□□□□□ -0.46
SCAF1-201ENST00000360565 G3V4G9 280 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 LGALS9O00182 355 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 M0QY20 66 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 PSMB8P28062 276 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 PIFOQ8TCI5 191 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 FOXI1Q12951 378 aa12.2□□□□□ -0.46
SCAF1-201ENST00000360565 CFAP54Q96N23 3096 aa12.19□□□□□ -0.46
SCAF1-201ENST00000360565 BAALC-AS2P0C853 105 aa12.19□□□□□ -0.46
SCAF1-201ENST00000360565 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
SCAF1-201ENST00000360565 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
SCAF1-201ENST00000360565 IGLV10-54A0A075B6I4 117 aa12.19□□□□□ -0.46
SCAF1-201ENST00000360565 DNAJC9-AS1A6NH13 148 aa12.19□□□□□ -0.46
SCAF1-201ENST00000360565 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
SCAF1-201ENST00000360565 AVPP01185 164 aa12.18□□□□□ -0.46
SCAF1-201ENST00000360565 Q6ZTI0 123 aa12.18□□□□□ -0.46
SCAF1-201ENST00000360565 DEFB114Q30KQ6 69 aa12.18□□□□□ -0.46
SCAF1-201ENST00000360565 IGLV4-3A0A075B6K6 122 aa12.17□□□□□ -0.46
SCAF1-201ENST00000360565 PROK1P58294 105 aa12.17□□□□□ -0.46
SCAF1-201ENST00000360565 KLLNB2CW77 178 aa12.17□□□□□ -0.46
SCAF1-201ENST00000360565 ZNF22P17026 224 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-201ENST00000360565 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
SCAF1-201ENST00000360565 IGHV4-4A0A075B6R2 117 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 TINCRA0A1B0GVN0 87 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 IGLV1-40P01703 118 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 WFDC11Q8NEX6 87 aa12.16□□□□□ -0.46
SCAF1-201ENST00000360565 TRBV10-1A0A0K0K1A3 114 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 TCL1BO95988 128 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 COX7B2Q8TF08 81 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 CLEC2BQ92478 149 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 HHLA3Q9XRX5 114 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 LINC00467Q9BRT7 94 aa12.15□□□□□ -0.46
SCAF1-201ENST00000360565 DCANP1Q8TF63 244 aa12.15□□□□□ -0.47
SCAF1-201ENST00000360565 TRIOO75962 3097 aa12.14□□□□□ -0.47
SCAF1-201ENST00000360565 DEFB4AO15263 64 aa12.14□□□□□ -0.47
SCAF1-201ENST00000360565 CRLF1O75462 422 aa12.14□□□□□ -0.47
SCAF1-201ENST00000360565 PRM2P04554 102 aa12.14□□□□□ -0.47
SCAF1-201ENST00000360565 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
SCAF1-201ENST00000360565 RS1O15537 224 aa12.14□□□□□ -0.47
SCAF1-201ENST00000360565 CDH23Q9H251 3354 aa12.14□□□□□ -0.47
SCAF1-201ENST00000360565 HIST2H2BCQ6DN03 193 aa12.13□□□□□ -0.47
SCAF1-201ENST00000360565 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
SCAF1-201ENST00000360565 A0A096LNJ9 63 aa12.13□□□□□ -0.47
SCAF1-201ENST00000360565 EDN2P20800 178 aa12.13□□□□□ -0.47
SCAF1-201ENST00000360565 TRBV6-5A0A0K0K1A5 114 aa12.12□□□□□ -0.47
SCAF1-201ENST00000360565 Q6ZSV7 163 aa12.12□□□□□ -0.47
SCAF1-201ENST00000360565 CRYGDP07320 174 aa12.12□□□□□ -0.47
SCAF1-201ENST00000360565 RBX1P62877 108 aa12.12□□□□□ -0.47
SCAF1-201ENST00000360565 DEFB135Q30KP9 77 aa12.12□□□□□ -0.47
SCAF1-201ENST00000360565 MIR7-3HGQ8N6C7 128 aa12.12□□□□□ -0.47
SCAF1-201ENST00000360565 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
SCAF1-201ENST00000360565 TMEM223A0PJW6 202 aa12.11□□□□□ -0.47
SCAF1-201ENST00000360565 CRYBA4P53673 196 aa12.11□□□□□ -0.47
SCAF1-201ENST00000360565 C18orf65Q6ZTR6 163 aa12.11□□□□□ -0.47
SCAF1-201ENST00000360565 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
SCAF1-201ENST00000360565 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
SCAF1-201ENST00000360565 ATP5G1P05496 136 aa12.1□□□□□ -0.47
SCAF1-201ENST00000360565 MIAQ16674 131 aa12.1□□□□□ -0.47
SCAF1-201ENST00000360565 C9orf153Q5TBE3 101 aa12.1□□□□□ -0.47
SCAF1-201ENST00000360565 ANKRD17O75179 2603 aaKnown RBP12.1□□□□□ -0.47
SCAF1-201ENST00000360565 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
SCAF1-201ENST00000360565 COX8CQ7Z4L0 72 aa12.1□□□□□ -0.47
SCAF1-201ENST00000360565 PCSK5Q92824 1860 aa12.09□□□□□ -0.47
SCAF1-201ENST00000360565 COX7A2LO14548 114 aa12.09□□□□□ -0.47
SCAF1-201ENST00000360565 PSMG3-AS1Q96PY0 264 aa12.09□□□□□ -0.47
SCAF1-201ENST00000360565 UBL5Q9BZL1 73 aa12.09□□□□□ -0.47
SCAF1-201ENST00000360565 HAMPP81172 84 aa12.09□□□□□ -0.47
SCAF1-201ENST00000360565 MRPL23Q16540 153 aaKnown RBP12.09□□□□□ -0.47
SCAF1-201ENST00000360565 ZMAT4Q9H898 229 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
SCAF1-201ENST00000360565 TSHBP01222 138 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 SPART-AS1P0CW21 52 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms