RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 FAM231AP0DMU4 169 aa11.76□□□□□ -0.53
TRAPPC11-202ENST00000357207 FAM231CP0DMU5 169 aa11.76□□□□□ -0.53
TRAPPC11-202ENST00000357207 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
TRAPPC11-202ENST00000357207 IGHV3-33P01772 117 aa11.76□□□□□ -0.53
TRAPPC11-202ENST00000357207 C20orf173Q96LM9 149 aa11.76□□□□□ -0.53
TRAPPC11-202ENST00000357207 NRACQ8N912 160 aa11.75□□□□□ -0.53
TRAPPC11-202ENST00000357207 J3KT08 172 aa11.75□□□□□ -0.53
TRAPPC11-202ENST00000357207 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
TRAPPC11-202ENST00000357207 Q9HAA7 133 aa11.75□□□□□ -0.53
TRAPPC11-202ENST00000357207 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 DEFB121Q5J5C9 76 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 EML5Q05BV3 1969 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 TLN2Q9Y4G6 2542 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 TMEM223A0PJW6 202 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 TMEM258P61165 79 aa11.74□□□□□ -0.53
TRAPPC11-202ENST00000357207 K7EQG2 157 aa11.73□□□□□ -0.53
TRAPPC11-202ENST00000357207 PSMB8P28062 276 aa11.73□□□□□ -0.53
TRAPPC11-202ENST00000357207 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
TRAPPC11-202ENST00000357207 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC11-202ENST00000357207 GAS8-AS1O95177 125 aa11.73□□□□□ -0.53
TRAPPC11-202ENST00000357207 HIST2H2BDQ6DRA6 164 aa11.73□□□□□ -0.53
TRAPPC11-202ENST00000357207 hADV29S1A0JD25 119 aa11.72□□□□□ -0.53
TRAPPC11-202ENST00000357207 SETD2Q9BYW2 2564 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC11-202ENST00000357207 IGHV4-4A0A075B6R2 117 aa11.72□□□□□ -0.53
TRAPPC11-202ENST00000357207 ATP5G1P05496 136 aa11.72□□□□□ -0.53
TRAPPC11-202ENST00000357207 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
TRAPPC11-202ENST00000357207 M0QY20 66 aa11.72□□□□□ -0.53
TRAPPC11-202ENST00000357207 TRIAP1O43715 76 aa11.71□□□□□ -0.53
TRAPPC11-202ENST00000357207 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.53
TRAPPC11-202ENST00000357207 TRBV30A0A0K0K1B3 111 aa11.71□□□□□ -0.54
TRAPPC11-202ENST00000357207 CFAP126Q5VTH2 177 aa11.71□□□□□ -0.54
TRAPPC11-202ENST00000357207 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.54
TRAPPC11-202ENST00000357207 MRAPQ8TCY5 172 aa11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 CNFNQ9BYD5 112 aa11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 C14orf132Q9NPU4 83 aa11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 NRGNQ92686 78 aa11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 DEFB105AQ8NG35 78 aa11.7□□□□□ -0.54
TRAPPC11-202ENST00000357207 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
TRAPPC11-202ENST00000357207 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
TRAPPC11-202ENST00000357207 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
TRAPPC11-202ENST00000357207 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
TRAPPC11-202ENST00000357207 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
TRAPPC11-202ENST00000357207 IGHV3-30P01768 117 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 IGHV3-30-5P0DP03 117 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 FUSP35637 526 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 MAP6D1Q9H9H5 199 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 TMEM256-PLSCR3K7ERE1 68 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 UFSP1Q6NVU6 142 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 CXCL5P42830 114 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 SPATA25Q9BR10 227 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 C1orf43Q9BWL3 253 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 USP9YO00507 2555 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 CEP192Q8TEP8 1941 aa11.68□□□□□ -0.54
TRAPPC11-202ENST00000357207 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
TRAPPC11-202ENST00000357207 INSL3P51460 131 aa11.67□□□□□ -0.54
TRAPPC11-202ENST00000357207 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
TRAPPC11-202ENST00000357207 LINC00308Q8TCZ7 52 aa11.67□□□□□ -0.54
TRAPPC11-202ENST00000357207 POLR2KP53803 58 aaKnown RBP11.67□□□□□ -0.54
TRAPPC11-202ENST00000357207 ZMAT4Q9H898 229 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 H3BQ85 93 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 NREPQ16612 68 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 PRR9Q5T870 116 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 Q6ZTI0 123 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 Q8N6K4 173 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 RMI2Q96E14 147 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 UQCRQO14949 82 aa11.66□□□□□ -0.54
TRAPPC11-202ENST00000357207 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
TRAPPC11-202ENST00000357207 SPAG11BQ08648 103 aa11.65□□□□□ -0.54
TRAPPC11-202ENST00000357207 CEP295Q9C0D2 2601 aa11.65□□□□□ -0.54
TRAPPC11-202ENST00000357207 MRPS12O15235 138 aaKnown RBP11.65□□□□□ -0.55
TRAPPC11-202ENST00000357207 PRB1P04280 392 aa11.65□□□□□ -0.55
TRAPPC11-202ENST00000357207 NCR3O14931 201 aa11.64□□□□□ -0.55
TRAPPC11-202ENST00000357207 PYGO1Q9Y3Y4 419 aa11.64□□□□□ -0.55
TRAPPC11-202ENST00000357207 C4orf3Q8WVX3 66 aa11.64□□□□□ -0.55
TRAPPC11-202ENST00000357207 XGP55808 180 aa11.64□□□□□ -0.55
TRAPPC11-202ENST00000357207 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
TRAPPC11-202ENST00000357207 Q6ZS46 218 aa11.63□□□□□ -0.55
TRAPPC11-202ENST00000357207 TIRAPP58753 221 aa11.63□□□□□ -0.55
TRAPPC11-202ENST00000357207 PTPRSQ13332 1948 aa11.63□□□□□ -0.55
TRAPPC11-202ENST00000357207 NDUFA1O15239 70 aa11.63□□□□□ -0.55
TRAPPC11-202ENST00000357207 PRO0255Q9UI72 69 aa11.63□□□□□ -0.55
TRAPPC11-202ENST00000357207 GOLGB1Q14789 3259 aaKnown RBP11.62□□□□□ -0.55
TRAPPC11-202ENST00000357207 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 PDE6GP18545 87 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 DIRC1Q969H9 104 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 TSHBP01222 138 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 PROK1P58294 105 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 UBE2BP63146 152 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 SDIM1Q6ZPB5 146 aa11.61□□□□□ -0.55
TRAPPC11-202ENST00000357207 TRAV23DV6A0A075B6W5 121 aa11.6□□□□□ -0.55
TRAPPC11-202ENST00000357207 A8MZ25 164 aa11.6□□□□□ -0.55
TRAPPC11-202ENST00000357207 KLLNB2CW77 178 aa11.6□□□□□ -0.55
TRAPPC11-202ENST00000357207 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
TRAPPC11-202ENST00000357207 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
TRAPPC11-202ENST00000357207 LRP4O75096 1905 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms