RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 UBTD1Q9HAC8 227 aa13.9□□□□□ -0.18
PRPF39-201ENST00000355765 COL12A1Q99715 3063 aa13.9□□□□□ -0.18
PRPF39-201ENST00000355765 A0A0U1RRA0 63 aa13.9□□□□□ -0.18
PRPF39-201ENST00000355765 YAE1D1Q9NRH1 226 aa13.9□□□□□ -0.18
PRPF39-201ENST00000355765 KLK5Q9Y337 293 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-201ENST00000355765 NPFFO15130 113 aa13.89□□□□□ -0.19
PRPF39-201ENST00000355765 PROK1P58294 105 aa13.89□□□□□ -0.19
PRPF39-201ENST00000355765 MRPS36P82909 103 aaKnown RBP13.89□□□□□ -0.19
PRPF39-201ENST00000355765 LOC107984640A0A0U1RRK4 108 aa13.89□□□□□ -0.19
PRPF39-201ENST00000355765 PF4V1P10720 104 aa13.89□□□□□ -0.19
PRPF39-201ENST00000355765 VSIG2Q96IQ7 327 aa13.89□□□□□ -0.19
PRPF39-201ENST00000355765 C19orf54Q5BKX5 351 aa13.88□□□□□ -0.19
PRPF39-201ENST00000355765 C11orf71Q6IPW1 123 aa13.88□□□□□ -0.19
PRPF39-201ENST00000355765 CCL21O00585 134 aa13.87□□□□□ -0.19
PRPF39-201ENST00000355765 MOB4Q9Y3A3 225 aa13.87□□□□□ -0.19
PRPF39-201ENST00000355765 HTN1P15515 57 aa13.87□□□□□ -0.19
PRPF39-201ENST00000355765 LY6EQ16553 131 aa13.87□□□□□ -0.19
PRPF39-201ENST00000355765 SPINK13Q1W4C9 94 aa13.87□□□□□ -0.19
PRPF39-201ENST00000355765 Q9UF83 564 aa13.87□□□□□ -0.19
PRPF39-201ENST00000355765 ZNF625Q96I27 306 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-201ENST00000355765 CITED2Q99967 270 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-201ENST00000355765 BRD3OSQ6XYD6 125 aa13.85□□□□□ -0.19
PRPF39-201ENST00000355765 C3orf22Q8N5N4 141 aa13.85□□□□□ -0.19
PRPF39-201ENST00000355765 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
PRPF39-201ENST00000355765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-201ENST00000355765 IGKV2-29A2NJV5 120 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-201ENST00000355765 NDUFA7O95182 113 aa13.84□□□□□ -0.19
PRPF39-201ENST00000355765 DCANP1Q8TF63 244 aa13.84□□□□□ -0.19
PRPF39-201ENST00000355765 DOPEY2Q9Y3R5 2298 aa13.83□□□□□ -0.19
PRPF39-201ENST00000355765 IGHV1OR15-1A0A075B7D0 117 aa13.83□□□□□ -0.2
PRPF39-201ENST00000355765 KNCNA6PVL3 124 aa13.83□□□□□ -0.2
PRPF39-201ENST00000355765 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.83□□□□□ -0.21e-8■■■■■ 27.5
PRPF39-201ENST00000355765 HERVK_113P63121 156 aa13.82□□□□□ -0.2
PRPF39-201ENST00000355765 VPS13CQ709C8 3753 aa13.82□□□□□ -0.2
PRPF39-201ENST00000355765 ITPR1Q14643 2758 aa13.81□□□□□ -0.2
PRPF39-201ENST00000355765 IGHG2P01859 326 aa13.81□□□□□ -0.2
PRPF39-201ENST00000355765 DAZ2Q13117 558 aaKnown RBP13.81□□□□□ -0.2
PRPF39-201ENST00000355765 DAZ4Q86SG3 579 aaKnown RBP13.81□□□□□ -0.2
PRPF39-201ENST00000355765 DAZ3Q9NR90 486 aaKnown RBP13.81□□□□□ -0.2
PRPF39-201ENST00000355765 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
PRPF39-201ENST00000355765 Q8N2B8 174 aa13.81□□□□□ -0.2
PRPF39-201ENST00000355765 CDKN2A-AS1Q9UH64 79 aa13.81□□□□□ -0.2
PRPF39-201ENST00000355765 MAP1AP78559 2803 aaPredicted RBP13.8□□□□□ -0.2
PRPF39-201ENST00000355765 PRM2P04554 102 aa13.8□□□□□ -0.2
PRPF39-201ENST00000355765 IMUPQ9GZP8 106 aa13.8□□□□□ -0.2
PRPF39-201ENST00000355765 TINCRA0A1B0GVN0 87 aa13.8□□□□□ -0.2
PRPF39-201ENST00000355765 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
PRPF39-201ENST00000355765 IGHV3-38A0A0C4DH36 116 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 A0A1W2PPR1 153 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 ACYP1P07311 99 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 UCNP55089 124 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 NRGNQ92686 78 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 BPESC1Q9GZL8 116 aa13.79□□□□□ -0.2
PRPF39-201ENST00000355765 CSDC2Q9Y534 153 aaKnown RBP13.79□□□□□ -0.2
PRPF39-201ENST00000355765 UQCRQO14949 82 aa13.78□□□□□ -0.2
PRPF39-201ENST00000355765 BLCAPP62952 87 aa13.78□□□□□ -0.2
PRPF39-201ENST00000355765 CREBBPQ92793 2442 aa13.78□□□□□ -0.2
PRPF39-201ENST00000355765 COX7A2LO14548 114 aa13.77□□□□□ -0.2
PRPF39-201ENST00000355765 LINC00308Q8TCZ7 52 aa13.77□□□□□ -0.2
PRPF39-201ENST00000355765 USMG5Q96IX5 58 aa13.77□□□□□ -0.2
PRPF39-201ENST00000355765 NACAE9PAV3 2078 aa13.77□□□□□ -0.2
PRPF39-201ENST00000355765 RS1O15537 224 aa13.77□□□□□ -0.21
PRPF39-201ENST00000355765 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.77□□□□□ -0.21
PRPF39-201ENST00000355765 UBE2D4Q9Y2X8 147 aa13.77□□□□□ -0.21
PRPF39-201ENST00000355765 BAALC-AS2P0C853 105 aa13.76□□□□□ -0.21
PRPF39-201ENST00000355765 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
PRPF39-201ENST00000355765 LMO4P61968 165 aa13.76□□□□□ -0.21
PRPF39-201ENST00000355765 GAGE2AQ6NT46 116 aa13.76□□□□□ -0.21
PRPF39-201ENST00000355765 LINC00526Q96FQ7 95 aa13.76□□□□□ -0.21
PRPF39-201ENST00000355765 Q9H8V8 135 aa13.76□□□□□ -0.21
PRPF39-201ENST00000355765 LY6DQ14210 128 aa13.75□□□□□ -0.21
PRPF39-201ENST00000355765 Q6ZSN1 163 aa13.75□□□□□ -0.21
PRPF39-201ENST00000355765 CHCHD7Q9BUK0 85 aa13.75□□□□□ -0.21
PRPF39-201ENST00000355765 ATP5J2P56134 94 aa13.74□□□□□ -0.21
PRPF39-201ENST00000355765 TIRAPP58753 221 aa13.74□□□□□ -0.21
PRPF39-201ENST00000355765 FBXL19-AS1Q494R0 122 aa13.74□□□□□ -0.21
PRPF39-201ENST00000355765 SOSTDC1Q6X4U4 206 aa13.74□□□□□ -0.21
PRPF39-201ENST00000355765 EDA2RQ9HAV5 297 aa13.74□□□□□ -0.21
PRPF39-201ENST00000355765 PKD1L2Q7Z442 2459 aa13.74□□□□□ -0.21
PRPF39-201ENST00000355765 NDUFA1O15239 70 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 TIMM17BO60830 172 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 COX6A2Q02221 97 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 CIRBPQ14011 172 aaKnown RBP13.73□□□□□ -0.21
PRPF39-201ENST00000355765 FAM218AQ96MZ4 157 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 ABCA2Q9BZC7 2435 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 KLRB1Q12918 225 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 CRYBG3Q68DQ2 2970 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 Q9HAA7 133 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 RBMY1A1P0DJD3 496 aaKnown RBP13.73□□□□□ -0.21
PRPF39-201ENST00000355765 RBMY1CP0DJD4 496 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 RBMY1FQ15415 496 aaKnown RBP13.73□□□□□ -0.21
PRPF39-201ENST00000355765 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
PRPF39-201ENST00000355765 HOXD3P31249 432 aaPredicted RBP13.72□□□□□ -0.21
PRPF39-201ENST00000355765 H3BUX3 64 aa13.71□□□□□ -0.21
PRPF39-201ENST00000355765 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
PRPF39-201ENST00000355765 ADORA2A-AS1P86434 159 aa13.71□□□□□ -0.21
PRPF39-201ENST00000355765 CACNA1AO00555 2505 aa13.71□□□□□ -0.21
PRPF39-201ENST00000355765 FAM19A5Q7Z5A7 132 aaPredicted RBP13.71□□□□□ -0.22
PRPF39-201ENST00000355765 hADV29S1A0JD25 119 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms