RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 URGCP-MRPS24S4R325 110 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 C7orf77A4D0Y5 90 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 FAM231BA6NCW3 169 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 HIGD1CA8MV81 97 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 SNAPINO95295 136 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 CTRLP40313 264 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 CACNG7P62955 275 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 RHEBQ15382 184 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 NEXN-AS1Q8NBZ9 246 aa10.31□□□□□ -0.76
PDGFA-201ENST00000354513 TRBV7-3A0A075B6L6 115 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 FOXA3P55318 350 aaPredicted RBP10.3□□□□□ -0.76
PDGFA-201ENST00000354513 MPV17L2Q567V2 206 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 BORCS7Q96B45 105 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 CTDSP1Q9GZU7 261 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
PDGFA-201ENST00000354513 A0A087WX48 190 aa10.29□□□□□ -0.76
PDGFA-201ENST00000354513 RPL36AP83881 106 aaKnown RBP10.29□□□□□ -0.76
PDGFA-201ENST00000354513 WDR73Q6P4I2 378 aa10.29□□□□□ -0.76
PDGFA-201ENST00000354513 NUP35Q8NFH5 326 aa10.29□□□□□ -0.76
PDGFA-201ENST00000354513 RPL36ALQ969Q0 106 aaKnown RBP10.29□□□□□ -0.76
PDGFA-201ENST00000354513 TRBV6-8A0A0A6YYG3 113 aa10.28□□□□□ -0.76
PDGFA-201ENST00000354513 NTF3P20783 257 aa10.28□□□□□ -0.76
PDGFA-201ENST00000354513 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
PDGFA-201ENST00000354513 RAB4BP61018 213 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 ELOBQ15370 118 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 TWIST1Q15672 202 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 CNFNQ9BYD5 112 aa10.27□□□□□ -0.77
PDGFA-201ENST00000354513 Q0VG73 95 aa10.26□□□□□ -0.77
PDGFA-201ENST00000354513 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
PDGFA-201ENST00000354513 TRGC1P0CF51 173 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 RIGQ13278 110 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 ZNF56Q15929 161 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 AP1S3Q96PC3 154 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 IMMP2LQ96T52 175 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 C1orf43Q9BWL3 253 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 KIF25-AS1Q9Y6Z4 181 aa10.25□□□□□ -0.77
PDGFA-201ENST00000354513 USP17L23D6RBM5 183 aa10.24□□□□□ -0.77
PDGFA-201ENST00000354513 KCNIP4Q6PIL6 250 aa10.24□□□□□ -0.77
PDGFA-201ENST00000354513 TMEM262E9PQX1 116 aa10.23□□□□□ -0.77
PDGFA-201ENST00000354513 PANO1I0J062 215 aa10.23□□□□□ -0.77
PDGFA-201ENST00000354513 PRSS1P07477 247 aa10.23□□□□□ -0.77
PDGFA-201ENST00000354513 SMIM17P0DL12 118 aa10.23□□□□□ -0.77
PDGFA-201ENST00000354513 S100PP25815 95 aa10.23□□□□□ -0.77
PDGFA-201ENST00000354513 MRPL54Q6P161 138 aaKnown RBP10.23□□□□□ -0.77
PDGFA-201ENST00000354513 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
PDGFA-201ENST00000354513 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
PDGFA-201ENST00000354513 SMIM15Q7Z3B0 74 aa10.22□□□□□ -0.77
PDGFA-201ENST00000354513 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
PDGFA-201ENST00000354513 OXTP01178 125 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 CRPP02741 224 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 MGPP08493 103 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 C14orf177Q52M58 125 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 CLPSL2Q6UWE3 100 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 BTF3L4Q96K17 158 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.78
PDGFA-201ENST00000354513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.21□□□□□ -0.78
PDGFA-201ENST00000354513 A0A1B0GW15 77 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 F5H697 171 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 ATP6V1G1O75348 118 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 CAMPP49913 170 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 HBBP68871 147 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 MIAQ16674 131 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 ATP5L2Q7Z4Y8 100 aa10.2□□□□□ -0.78
PDGFA-201ENST00000354513 TRAV9-1A0A075B6T8 112 aa10.19□□□□□ -0.78
PDGFA-201ENST00000354513 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
PDGFA-201ENST00000354513 S100A8P05109 93 aa10.19□□□□□ -0.78
PDGFA-201ENST00000354513 RBX1P62877 108 aa10.19□□□□□ -0.78
PDGFA-201ENST00000354513 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
PDGFA-201ENST00000354513 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
PDGFA-201ENST00000354513 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
PDGFA-201ENST00000354513 GAGE6Q13070 117 aa10.18□□□□□ -0.78
PDGFA-201ENST00000354513 TMEM191AQ9H0A3 160 aa10.18□□□□□ -0.78
PDGFA-201ENST00000354513 S100A1P23297 94 aa10.17□□□□□ -0.78
PDGFA-201ENST00000354513 SERTAD4-AS1Q5TG53 156 aa10.17□□□□□ -0.78
PDGFA-201ENST00000354513 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
PDGFA-201ENST00000354513 IQCJQ1A5X6 159 aa10.16□□□□□ -0.78
PDGFA-201ENST00000354513 DGAT2L7PQ6IED9 249 aa10.16□□□□□ -0.78
PDGFA-201ENST00000354513 CBLN2Q8IUK8 224 aa10.16□□□□□ -0.78
PDGFA-201ENST00000354513 SMCO4Q9NRQ5 59 aa10.16□□□□□ -0.78
PDGFA-201ENST00000354513 TNXBP22105 4242 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 M0QY20 66 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 PKIAP61925 76 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 TMEM97Q5BJF2 176 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 SDIM1Q6ZPB5 146 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 AMN1Q8IY45 258 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.78
PDGFA-201ENST00000354513 TGIF2-C20orf24A0A0A6YYL0 155 aa10.14□□□□□ -0.79
PDGFA-201ENST00000354513 MT1HL1P0DM35 61 aa10.14□□□□□ -0.79
PDGFA-201ENST00000354513 RAB4AP20338 218 aa10.14□□□□□ -0.79
PDGFA-201ENST00000354513 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
PDGFA-201ENST00000354513 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
PDGFA-201ENST00000354513 RASL11AQ6T310 242 aa10.14□□□□□ -0.79
PDGFA-201ENST00000354513 GATD1Q8NB37 220 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms