RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 TOMM6Q96B49 74 aa14.08□□□□□ -0.16
UBE3C-201ENST00000348165 NDUFV3P56181 108 aaKnown RBP14.07□□□□□ -0.16
UBE3C-201ENST00000348165 HIST2H2BDQ6DRA6 164 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 CEMP1Q6PRD7 247 aaPredicted RBP14.07□□□□□ -0.16
UBE3C-201ENST00000348165 FSTL3O95633 263 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 C11orf86A6NJI1 115 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 Q6ZTI0 123 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 PTH2Q96A98 100 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 TIMM17AQ99595 171 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 IGKV3D-7A0A0C4DH55 119 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 MT-ATP8P03928 68 aa14.07□□□□□ -0.16
UBE3C-201ENST00000348165 EIF4EBP1Q13541 118 aaPredicted RBP14.06□□□□□ -0.16
UBE3C-201ENST00000348165 P0DMU3 169 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 FAM231AP0DMU4 169 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 FAM231CP0DMU5 169 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 hADV29S1A0JD25 119 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 LY6LH3BQJ8 138 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 C20orf203Q8NBC4 194 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 Q6ZSV7 163 aa14.06□□□□□ -0.16
UBE3C-201ENST00000348165 K7EQG2 157 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 CRYGBP07316 175 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 EBI3Q14213 229 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 DEFB114Q30KQ6 69 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 ORMDL1Q9P0S3 153 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 FN1P02751 2386 aaKnown RBP14.05□□□□□ -0.16
UBE3C-201ENST00000348165 SPTBN4Q9H254 2564 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 IGLV2-8P01709 118 aa14.05□□□□□ -0.16
UBE3C-201ENST00000348165 ZNF462Q96JM2 2506 aa14.04□□□□□ -0.16
UBE3C-201ENST00000348165 TIRAPP58753 221 aa14.04□□□□□ -0.16
UBE3C-201ENST00000348165 TNRC6AQ8NDV7 1962 aaKnown RBP14.04□□□□□ -0.16
UBE3C-201ENST00000348165 NDUFA1O15239 70 aa14.04□□□□□ -0.16
UBE3C-201ENST00000348165 NDUFA11Q86Y39 141 aa14.04□□□□□ -0.16
UBE3C-201ENST00000348165 TRBV10-2A0A0K0K1G8 114 aa14.03□□□□□ -0.16
UBE3C-201ENST00000348165 SPAG11BQ08648 103 aa14.03□□□□□ -0.16
UBE3C-201ENST00000348165 CDSNQ15517 529 aa14.03□□□□□ -0.16
UBE3C-201ENST00000348165 COL4A4P53420 1690 aaPredicted RBP14.02□□□□□ -0.16
UBE3C-201ENST00000348165 BRK1Q8WUW1 75 aa14.02□□□□□ -0.17
UBE3C-201ENST00000348165 H3BT86 120 aa14.02□□□□□ -0.17
UBE3C-201ENST00000348165 ODF1Q14990 250 aa14.01□□□□□ -0.17
UBE3C-201ENST00000348165 C20orf173Q96LM9 149 aa14.01□□□□□ -0.17
UBE3C-201ENST00000348165 TRBV10-1A0A0K0K1A3 114 aa14.01□□□□□ -0.17
UBE3C-201ENST00000348165 LGALS9O00182 355 aa14.01□□□□□ -0.17
UBE3C-201ENST00000348165 SPANXB1Q9NS25 103 aaPredicted RBP14.01□□□□□ -0.17
UBE3C-201ENST00000348165 PSMB8P28062 276 aa14.01□□□□□ -0.17
UBE3C-201ENST00000348165 C10orf142B7Z368 130 aa14□□□□□ -0.17
UBE3C-201ENST00000348165 FAM222AQ5U5X8 452 aa14□□□□□ -0.17
UBE3C-201ENST00000348165 E9PLD3 99 aa14□□□□□ -0.17
UBE3C-201ENST00000348165 KIAA1549Q9HCM3 1950 aa14□□□□□ -0.17
UBE3C-201ENST00000348165 MLST8Q9BVC4 326 aa13.99□□□□□ -0.17
UBE3C-201ENST00000348165 ZFAND3Q9H8U3 227 aa13.99□□□□□ -0.17
UBE3C-201ENST00000348165 C11orf45Q8TAV5 145 aa13.99□□□□□ -0.17
UBE3C-201ENST00000348165 A0A1B0GXF2 115 aa13.99□□□□□ -0.17
UBE3C-201ENST00000348165 NCR3O14931 201 aa13.98□□□□□ -0.17
UBE3C-201ENST00000348165 LINC00482Q8N8I6 264 aa13.98□□□□□ -0.17
UBE3C-201ENST00000348165 MIR7-3HGQ8N6C7 128 aa13.98□□□□□ -0.17
UBE3C-201ENST00000348165 CLUHP3Q96NS8 147 aa13.98□□□□□ -0.17
UBE3C-201ENST00000348165 CEP192Q8TEP8 1941 aa13.98□□□□□ -0.17
UBE3C-201ENST00000348165 H0YGX0 51 aa13.98□□□□□ -0.17
UBE3C-201ENST00000348165 TM2D2Q9BX73 214 aa13.97□□□□□ -0.17
UBE3C-201ENST00000348165 IGLC6P0CF74 106 aa13.97□□□□□ -0.17
UBE3C-201ENST00000348165 GDF5OSQ5U4N7 250 aa13.97□□□□□ -0.17
UBE3C-201ENST00000348165 KLK5Q9Y337 293 aaPredicted RBP13.97□□□□□ -0.17
UBE3C-201ENST00000348165 UQCRQO14949 82 aa13.96□□□□□ -0.17
UBE3C-201ENST00000348165 LINC00643Q86TS7 51 aa13.96□□□□□ -0.17
UBE3C-201ENST00000348165 LRRK2Q5S007 2527 aa13.96□□□□□ -0.17
UBE3C-201ENST00000348165 IGHV4-28A0A0C4DH34 117 aa13.96□□□□□ -0.17
UBE3C-201ENST00000348165 IGHV1-58A0A0C4DH39 117 aa13.96□□□□□ -0.18
UBE3C-201ENST00000348165 LY6G6DO95868 133 aa13.95□□□□□ -0.18
UBE3C-201ENST00000348165 ODF3Q96PU9 254 aa13.94□□□□□ -0.18
UBE3C-201ENST00000348165 PKIGQ9Y2B9 76 aa13.94□□□□□ -0.18
UBE3C-201ENST00000348165 FASNP49327 2511 aaKnown RBP13.94□□□□□ -0.18
UBE3C-201ENST00000348165 FUSP35637 526 aaKnown RBP eCLIP13.93□□□□□ -0.187e-7■□□□□ 10.3
UBE3C-201ENST00000348165 TCL1BO95988 128 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 Q6ZS46 218 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 YPEL4Q96NS1 127 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 NDUFS5O43920 106 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 LINC00269Q8N2A0 174 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 CXCL5P42830 114 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 HIGD2BQ4VC39 106 aa13.93□□□□□ -0.18
UBE3C-201ENST00000348165 LECT2O14960 151 aa13.92□□□□□ -0.18
UBE3C-201ENST00000348165 ZFAND2AQ8N6M9 145 aa13.92□□□□□ -0.18
UBE3C-201ENST00000348165 CRIP1P50238 77 aa13.91□□□□□ -0.18
UBE3C-201ENST00000348165 LINC01006Q8NI28 216 aa13.91□□□□□ -0.18
UBE3C-201ENST00000348165 CLEC2BQ92478 149 aa13.91□□□□□ -0.18
UBE3C-201ENST00000348165 TP73-AS1Q9UF72 201 aa13.91□□□□□ -0.18
UBE3C-201ENST00000348165 UBE2AP49459 152 aa13.9□□□□□ -0.18
UBE3C-201ENST00000348165 ZNF702PQ9H963 129 aa13.9□□□□□ -0.18
UBE3C-201ENST00000348165 Q8N6K4 173 aa13.9□□□□□ -0.18
UBE3C-201ENST00000348165 PSMG3-AS1Q96PY0 264 aa13.9□□□□□ -0.18
UBE3C-201ENST00000348165 GOLGB1Q14789 3259 aaKnown RBP13.9□□□□□ -0.18
UBE3C-201ENST00000348165 NUP210LQ5VU65 1888 aa13.9□□□□□ -0.19
UBE3C-201ENST00000348165 MBD6Q96DN6 1003 aa13.89□□□□□ -0.19
UBE3C-201ENST00000348165 PKD1L2Q7Z442 2459 aa13.89□□□□□ -0.19
UBE3C-201ENST00000348165 MUC22E2RYF6 1773 aaPredicted RBP13.89□□□□□ -0.19
UBE3C-201ENST00000348165 IGKV2-24A0A0C4DH68 120 aa13.89□□□□□ -0.19
UBE3C-201ENST00000348165 LINC00467Q9BRT7 94 aa13.89□□□□□ -0.19
UBE3C-201ENST00000348165 REG3AQ06141 175 aa13.88□□□□□ -0.19
UBE3C-201ENST00000348165 C18orf65Q6ZTR6 163 aa13.88□□□□□ -0.19
UBE3C-201ENST00000348165 SMIM9A6NGZ8 99 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms