RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 C11orf52Q96A22 123 aa12.66□□□□□ -0.38
KCNQ2-201ENST00000344425 SMLR1H3BR10 107 aa12.65□□□□□ -0.38
KCNQ2-201ENST00000344425 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
KCNQ2-201ENST00000344425 CENPWQ5EE01 88 aa12.65□□□□□ -0.38
KCNQ2-201ENST00000344425 KANTRA0A1W2PQU2 76 aa12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 GAGE12HA6NDE8 117 aa12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 EIF5AP63241 154 aaKnown RBP12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 COX6A2Q02221 97 aa12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 SMIM12Q96EX1 92 aa12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 GNG13Q9P2W3 67 aa12.64□□□□□ -0.39
KCNQ2-201ENST00000344425 TNXBP22105 4242 aa12.63□□□□□ -0.39
KCNQ2-201ENST00000344425 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
KCNQ2-201ENST00000344425 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
KCNQ2-201ENST00000344425 GTSF1Q8WW33 167 aa12.63□□□□□ -0.39
KCNQ2-201ENST00000344425 HMSDA8MTL9 139 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 BCL2L11O43521 198 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 IFNA1P01562 189 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 NTF3P20783 257 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 MAJINQ3KP22 176 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 IGKV3OR2-268A0A0C4DH90 116 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 GNG4P50150 75 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 CCL20P78556 96 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
KCNQ2-201ENST00000344425 HIGD2BQ4VC39 106 aa12.61□□□□□ -0.39
KCNQ2-201ENST00000344425 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
KCNQ2-201ENST00000344425 IGKV2-24A0A0C4DH68 120 aa12.6□□□□□ -0.39
KCNQ2-201ENST00000344425 RAB19A4D1S5 217 aa12.6□□□□□ -0.39
KCNQ2-201ENST00000344425 AMMECR1LQ6DCA0 310 aa12.6□□□□□ -0.39
KCNQ2-201ENST00000344425 C9orf62Q8N4C0 152 aa12.6□□□□□ -0.39
KCNQ2-201ENST00000344425 PRSS3P2Q8NHM4 247 aa12.6□□□□□ -0.39
KCNQ2-201ENST00000344425 TEX46H3BTG2 121 aa12.59□□□□□ -0.39
KCNQ2-201ENST00000344425 LRP2P98164 4655 aa12.59□□□□□ -0.39
KCNQ2-201ENST00000344425 STPG4Q8N801 248 aa12.59□□□□□ -0.39
KCNQ2-201ENST00000344425 CHCHD10Q8WYQ3 142 aaPredicted RBP12.59□□□□□ -0.39
KCNQ2-201ENST00000344425 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
KCNQ2-201ENST00000344425 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
KCNQ2-201ENST00000344425 PDE6DO43924 150 aa12.57□□□□□ -0.4
KCNQ2-201ENST00000344425 TWIST1Q15672 202 aa12.57□□□□□ -0.4
KCNQ2-201ENST00000344425 GVQW2A0A096LPI5 108 aaPredicted RBP12.56□□□□□ -0.4
KCNQ2-201ENST00000344425 NCR2O95944 276 aa12.56□□□□□ -0.4
KCNQ2-201ENST00000344425 RNASEKQ6P5S7 137 aaKnown RBP12.56□□□□□ -0.4
KCNQ2-201ENST00000344425 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
KCNQ2-201ENST00000344425 LINC00474Q9P2X8 69 aa12.56□□□□□ -0.4
KCNQ2-201ENST00000344425 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
KCNQ2-201ENST00000344425 H7C423 109 aa12.55□□□□□ -0.4
KCNQ2-201ENST00000344425 CTRLP40313 264 aa12.55□□□□□ -0.4
KCNQ2-201ENST00000344425 GATD1Q8NB37 220 aa12.55□□□□□ -0.4
KCNQ2-201ENST00000344425 MED9Q9NWA0 146 aa12.55□□□□□ -0.4
KCNQ2-201ENST00000344425 MEF2BQ02080 365 aaPredicted RBP12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 CNFNQ9BYD5 112 aa12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 RNF213Q63HN8 5207 aa12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 APCSP02743 223 aa12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 NUDT10Q8NFP7 164 aa12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 NUDT11Q96G61 164 aa12.54□□□□□ -0.4
KCNQ2-201ENST00000344425 TRBV20OR9-2A0A075B6H5 130 aa12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 A0A0J9YXV3 536 aa12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 REG3GQ6UW15 175 aa12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 SPINK6Q6UWN8 80 aa12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 Q6ZNX1 250 aa12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 SMIM15Q7Z3B0 74 aa12.53□□□□□ -0.4
KCNQ2-201ENST00000344425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.52□□□□□ -0.41
KCNQ2-201ENST00000344425 A0A096LNI7 61 aa12.52□□□□□ -0.41
KCNQ2-201ENST00000344425 IGKV2-29A2NJV5 120 aaPredicted RBP12.52□□□□□ -0.41
KCNQ2-201ENST00000344425 FGF6P10767 208 aa12.52□□□□□ -0.41
KCNQ2-201ENST00000344425 TEX261Q6UWH6 196 aa12.52□□□□□ -0.41
KCNQ2-201ENST00000344425 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
KCNQ2-201ENST00000344425 FOXI1Q12951 378 aa12.51□□□□□ -0.41
KCNQ2-201ENST00000344425 OR5A1Q8NGJ0 315 aa12.51□□□□□ -0.41
KCNQ2-201ENST00000344425 BTF3L4Q96K17 158 aa12.51□□□□□ -0.41
KCNQ2-201ENST00000344425 RPL39LQ96EH5 51 aaKnown RBP12.5□□□□□ -0.41
KCNQ2-201ENST00000344425 TMEM101Q96IK0 257 aa12.5□□□□□ -0.41
KCNQ2-201ENST00000344425 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
KCNQ2-201ENST00000344425 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
KCNQ2-201ENST00000344425 IGHV1-58A0A0C4DH39 117 aa12.48□□□□□ -0.41
KCNQ2-201ENST00000344425 BCL2P10415 239 aa12.48□□□□□ -0.41
KCNQ2-201ENST00000344425 XCL1P47992 114 aa12.48□□□□□ -0.41
KCNQ2-201ENST00000344425 KRTAP10-8P60410 259 aa12.48□□□□□ -0.41
KCNQ2-201ENST00000344425 PMCHP20382 165 aa12.47□□□□□ -0.41
KCNQ2-201ENST00000344425 Q6ZRP5 223 aa12.47□□□□□ -0.41
KCNQ2-201ENST00000344425 CARD19Q96LW7 228 aa12.47□□□□□ -0.41
KCNQ2-201ENST00000344425 RNASE7Q9H1E1 156 aaKnown RBP12.47□□□□□ -0.41
KCNQ2-201ENST00000344425 LINC00959A0A1B0GUT2 108 aa12.46□□□□□ -0.41
KCNQ2-201ENST00000344425 I3L3M4 83 aa12.46□□□□□ -0.41
KCNQ2-201ENST00000344425 CCL25O15444 150 aa12.46□□□□□ -0.41
KCNQ2-201ENST00000344425 TAGLN2P37802 199 aaKnown RBP12.45□□□□□ -0.42
KCNQ2-201ENST00000344425 ODF1Q14990 250 aa12.45□□□□□ -0.42
KCNQ2-201ENST00000344425 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
KCNQ2-201ENST00000344425 SRSF9Q13242 221 aaKnown RBP eCLIP12.45□□□□□ -0.42
KCNQ2-201ENST00000344425 SS18Q15532 418 aa12.45□□□□□ -0.42
KCNQ2-201ENST00000344425 FAM210AQ96ND0 272 aa12.45□□□□□ -0.42
KCNQ2-201ENST00000344425 FAM231BA6NCW3 169 aa12.44□□□□□ -0.42
KCNQ2-201ENST00000344425 FOXA3P55318 350 aaPredicted RBP12.44□□□□□ -0.42
KCNQ2-201ENST00000344425 SYCNQ0VAF6 134 aa12.44□□□□□ -0.42
KCNQ2-201ENST00000344425 OCC1Q8TAD7 63 aa12.44□□□□□ -0.42
KCNQ2-201ENST00000344425 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
KCNQ2-201ENST00000344425 TRBV6-5A0A0K0K1A5 114 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms