RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
PKN1-202ENST00000342216 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
PKN1-202ENST00000342216 Q9HAA7 133 aa11.1□□□□□ -0.63
PKN1-202ENST00000342216 SPANXCQ9NY87 97 aa11.1□□□□□ -0.63
PKN1-202ENST00000342216 ANKRD11Q6UB99 2663 aaPredicted RBP11.1□□□□□ -0.63
PKN1-202ENST00000342216 CD28P10747 220 aa11.1□□□□□ -0.63
PKN1-202ENST00000342216 ZFHX3Q15911 3703 aa11.1□□□□□ -0.63
PKN1-202ENST00000342216 BSNQ9UPA5 3926 aa11.09□□□□□ -0.63
PKN1-202ENST00000342216 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
PKN1-202ENST00000342216 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
PKN1-202ENST00000342216 MRPL53Q96EL3 112 aaKnown RBP11.09□□□□□ -0.63
PKN1-202ENST00000342216 CELSR1Q9NYQ6 3014 aa11.09□□□□□ -0.63
PKN1-202ENST00000342216 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
PKN1-202ENST00000342216 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
PKN1-202ENST00000342216 CXCL5P42830 114 aa11.08□□□□□ -0.64
PKN1-202ENST00000342216 TMEM258P61165 79 aa11.08□□□□□ -0.64
PKN1-202ENST00000342216 RPL18AQ02543 176 aaKnown RBP11.08□□□□□ -0.64
PKN1-202ENST00000342216 DEFB109BQ30KR1 87 aa11.08□□□□□ -0.64
PKN1-202ENST00000342216 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
PKN1-202ENST00000342216 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
PKN1-202ENST00000342216 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
PKN1-202ENST00000342216 HIST1H4AP62805 103 aaKnown RBP11.07□□□□□ -0.64
PKN1-202ENST00000342216 FAM218AQ96MZ4 157 aa11.07□□□□□ -0.64
PKN1-202ENST00000342216 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
PKN1-202ENST00000342216 IGHV3OR16-10A0A075B7F0 116 aa11.07□□□□□ -0.64
PKN1-202ENST00000342216 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
PKN1-202ENST00000342216 COX7A2LO14548 114 aa11.06□□□□□ -0.64
PKN1-202ENST00000342216 E7EQL1 145 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 M0QY20 66 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 LENEPQ9Y5L5 61 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 IGHV3-73A0A0B4J1V6 119 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
PKN1-202ENST00000342216 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
PKN1-202ENST00000342216 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
PKN1-202ENST00000342216 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
PKN1-202ENST00000342216 MED14OSP0DP75 135 aa11.04□□□□□ -0.64
PKN1-202ENST00000342216 SERP2Q8N6R1 65 aa11.04□□□□□ -0.64
PKN1-202ENST00000342216 CREBBPQ92793 2442 aa11.03□□□□□ -0.64
PKN1-202ENST00000342216 SORL1Q92673 2214 aa11.03□□□□□ -0.64
PKN1-202ENST00000342216 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
PKN1-202ENST00000342216 FAM104AQ969W3 186 aa11.03□□□□□ -0.64
PKN1-202ENST00000342216 C14orf132Q9NPU4 83 aa11.03□□□□□ -0.64
PKN1-202ENST00000342216 Q8N9W7 124 aa11.03□□□□□ -0.64
PKN1-202ENST00000342216 FAM110DQ8TAY7 271 aaPredicted RBP11.03□□□□□ -0.64
PKN1-202ENST00000342216 TRBV12-3P01733 135 aa11.02□□□□□ -0.64
PKN1-202ENST00000342216 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 TRBV6-5A0A0K0K1A5 114 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
PKN1-202ENST00000342216 FHL2Q14192 279 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 BEAN1Q3B7T3 259 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 DNAL4O96015 105 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 U3KQE9 123 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 LINC01561Q8N1V8 128 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 LINC00308Q8TCZ7 52 aa11.01□□□□□ -0.65
PKN1-202ENST00000342216 SOSTDC1Q6X4U4 206 aa11□□□□□ -0.65
PKN1-202ENST00000342216 LINC00846Q9NV44 126 aa11□□□□□ -0.65
PKN1-202ENST00000342216 PROK1P58294 105 aa10.99□□□□□ -0.65
PKN1-202ENST00000342216 C1orf43Q9BWL3 253 aa10.99□□□□□ -0.65
PKN1-202ENST00000342216 Q9UF83 564 aa10.99□□□□□ -0.65
PKN1-202ENST00000342216 Q8N6K4 173 aa10.99□□□□□ -0.65
PKN1-202ENST00000342216 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
PKN1-202ENST00000342216 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
PKN1-202ENST00000342216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.98□□□□□ -0.65
PKN1-202ENST00000342216 IGKV2-29A2NJV5 120 aaPredicted RBP10.98□□□□□ -0.65
PKN1-202ENST00000342216 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 HILS1P60008 231 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 WFDC9Q8NEX5 89 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 INAFM2P0DMQ5 153 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
PKN1-202ENST00000342216 LINC00336Q6ZUF6 198 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 Q9H8V8 135 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 NOTCH3Q9UM47 2321 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 ODF3BA8MYP8 253 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 SOCS3O14543 225 aa10.98□□□□□ -0.65
PKN1-202ENST00000342216 ANKHD1Q8IWZ3 2542 aaKnown RBP10.97□□□□□ -0.65
PKN1-202ENST00000342216 TLN1Q9Y490 2541 aaKnown RBP10.97□□□□□ -0.65
PKN1-202ENST00000342216 IGHG2P01859 326 aa10.97□□□□□ -0.65
PKN1-202ENST00000342216 MALP21145 153 aa10.97□□□□□ -0.65
PKN1-202ENST00000342216 EDN2P20800 178 aa10.97□□□□□ -0.65
PKN1-202ENST00000342216 PFN2P35080 140 aa10.97□□□□□ -0.65
PKN1-202ENST00000342216 J3QLI3 93 aa10.96□□□□□ -0.65
PKN1-202ENST00000342216 IGHV3-11P01762 117 aa10.96□□□□□ -0.66
PKN1-202ENST00000342216 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.66
PKN1-202ENST00000342216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.66
PKN1-202ENST00000342216 HTN1P15515 57 aa10.95□□□□□ -0.66
PKN1-202ENST00000342216 MRAPQ8TCY5 172 aa10.95□□□□□ -0.66
PKN1-202ENST00000342216 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
PKN1-202ENST00000342216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.95□□□□□ -0.662e-6■■■□□ 16.4
PKN1-202ENST00000342216 TINCRA0A1B0GVN0 87 aa10.94□□□□□ -0.66
PKN1-202ENST00000342216 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
PKN1-202ENST00000342216 IGHV3-38A0A0C4DH36 116 aa10.94□□□□□ -0.66
PKN1-202ENST00000342216 KNCNA6PVL3 124 aa10.94□□□□□ -0.66
PKN1-202ENST00000342216 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
PKN1-202ENST00000342216 UCNP55089 124 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms