RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
LIN54-201ENST00000340417 HERV-K104P63124 156 aa9.44□□□□□ -0.9
LIN54-201ENST00000340417 FN1P02751 2386 aaKnown RBP9.44□□□□□ -0.9
LIN54-201ENST00000340417 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
LIN54-201ENST00000340417 POLQO75417 2590 aa9.44□□□□□ -0.9
LIN54-201ENST00000340417 F8P00451 2351 aa9.44□□□□□ -0.9
LIN54-201ENST00000340417 RS1O15537 224 aa9.44□□□□□ -0.9
LIN54-201ENST00000340417 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
LIN54-201ENST00000340417 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 J3QQQ9 107 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 ZFAND2AQ8N6M9 145 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 HIST1H2BLQ99880 126 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 LECT2O14960 151 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 CXCL5P42830 114 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 DDTP30046 118 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 TIMM17AQ99595 171 aa9.43□□□□□ -0.9
LIN54-201ENST00000340417 Q6ZTC4 211 aa9.42□□□□□ -0.9
LIN54-201ENST00000340417 DEFB105AQ8NG35 78 aa9.42□□□□□ -0.9
LIN54-201ENST00000340417 CITED1Q99966 193 aa9.42□□□□□ -0.9
LIN54-201ENST00000340417 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
LIN54-201ENST00000340417 TANC2Q9HCD6 1990 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 PRM2P04554 102 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 CHCHD10Q8WYQ3 142 aaPredicted RBP9.41□□□□□ -0.9
LIN54-201ENST00000340417 C2CD3Q4AC94 2353 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 TRBV6-8A0A0A6YYG3 113 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 A0A1B0GWB2 263 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 LELP1Q5T871 98 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 HIST3H2BBQ8N257 126 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 SPATA3Q8NHX4 192 aa9.41□□□□□ -0.9
LIN54-201ENST00000340417 ANKRD17O75179 2603 aaKnown RBP9.41□□□□□ -0.9
LIN54-201ENST00000340417 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.9
LIN54-201ENST00000340417 PCSK5Q92824 1860 aa9.4□□□□□ -0.9
LIN54-201ENST00000340417 TRAV13-2A0A0B4J235 113 aa9.4□□□□□ -0.9
LIN54-201ENST00000340417 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
LIN54-201ENST00000340417 FHL3Q13643 280 aa9.4□□□□□ -0.9
LIN54-201ENST00000340417 H3BUT2 72 aa9.4□□□□□ -0.9
LIN54-201ENST00000340417 SPCS1Q9Y6A9 102 aa9.4□□□□□ -0.91
LIN54-201ENST00000340417 TET2Q6N021 2002 aaPredicted RBP9.39□□□□□ -0.91
LIN54-201ENST00000340417 MRGPRG-AS1Q2M3A8 158 aa9.39□□□□□ -0.91
LIN54-201ENST00000340417 MIAQ16674 131 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 LGALS9CQ6DKI2 356 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 H7C423 109 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 A0A087WZ39 114 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 C1orf134Q5TEV5 83 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 DKK2Q9UBU2 259 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
LIN54-201ENST00000340417 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
LIN54-201ENST00000340417 LOC100131303A0A0U1RQF7 123 aa9.37□□□□□ -0.91
LIN54-201ENST00000340417 C19orf71A6NCJ1 209 aa9.37□□□□□ -0.91
LIN54-201ENST00000340417 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
LIN54-201ENST00000340417 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
LIN54-201ENST00000340417 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
LIN54-201ENST00000340417 IGHV1-58A0A0C4DH39 117 aa9.37□□□□□ -0.91
LIN54-201ENST00000340417 Q6ZUT4 128 aa9.37□□□□□ -0.91
LIN54-201ENST00000340417 KLLNB2CW77 178 aa9.36□□□□□ -0.91
LIN54-201ENST00000340417 B9D2Q9BPU9 175 aa9.36□□□□□ -0.91
LIN54-201ENST00000340417 MAJINQ3KP22 176 aa9.36□□□□□ -0.91
LIN54-201ENST00000340417 ACANP16112 2415 aa9.35□□□□□ -0.91
LIN54-201ENST00000340417 NCR3O14931 201 aa9.35□□□□□ -0.91
LIN54-201ENST00000340417 TRAV8-4A0A0B4J246 113 aa9.35□□□□□ -0.91
LIN54-201ENST00000340417 HCFC1P51610 2035 aa9.35□□□□□ -0.91
LIN54-201ENST00000340417 Q8N976 141 aa9.35□□□□□ -0.91
LIN54-201ENST00000340417 LINC00467Q9BRT7 94 aa9.35□□□□□ -0.91
LIN54-201ENST00000340417 MTORP42345 2549 aa9.34□□□□□ -0.91
LIN54-201ENST00000340417 FSHBP01225 129 aa9.34□□□□□ -0.91
LIN54-201ENST00000340417 CRYBA4P53673 196 aa9.34□□□□□ -0.91
LIN54-201ENST00000340417 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
LIN54-201ENST00000340417 PRR9Q5T870 116 aa9.33□□□□□ -0.92
LIN54-201ENST00000340417 WWC2-AS2Q96NR7 200 aa9.33□□□□□ -0.92
LIN54-201ENST00000340417 OPRPNQ99935 248 aaPredicted RBP9.33□□□□□ -0.92
LIN54-201ENST00000340417 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 RBX1P62877 108 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 LINC00322Q6ZN03 302 aaPredicted RBP9.32□□□□□ -0.92
LIN54-201ENST00000340417 IGLV5-52A0A0A0MRZ9 124 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 C9orf153Q5TBE3 101 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 SBSPONQ8IVN8 264 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 SND1-IT1Q9HBX3 110 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 SAMD5Q5TGI4 173 aa9.32□□□□□ -0.92
LIN54-201ENST00000340417 BAALCQ8WXS3 180 aa9.31□□□□□ -0.92
LIN54-201ENST00000340417 UFSP1Q6NVU6 142 aa9.31□□□□□ -0.92
LIN54-201ENST00000340417 C1orf158Q8N1D5 194 aa9.31□□□□□ -0.92
LIN54-201ENST00000340417 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
LIN54-201ENST00000340417 M0QY20 66 aa9.3□□□□□ -0.92
LIN54-201ENST00000340417 BEAN1Q3B7T3 259 aa9.3□□□□□ -0.92
LIN54-201ENST00000340417 FAM19A5Q7Z5A7 132 aaPredicted RBP9.3□□□□□ -0.92
LIN54-201ENST00000340417 UBE2D1P51668 147 aa9.3□□□□□ -0.92
LIN54-201ENST00000340417 MUC7Q8TAX7 377 aa9.3□□□□□ -0.92
LIN54-201ENST00000340417 K7ERU9 68 aa9.3□□□□□ -0.92
LIN54-201ENST00000340417 PCNTO95613 3336 aa9.29□□□□□ -0.92
LIN54-201ENST00000340417 RNASE3P12724 160 aaKnown RBP9.29□□□□□ -0.92
LIN54-201ENST00000340417 TDRG1Q3Y452 100 aa9.29□□□□□ -0.92
LIN54-201ENST00000340417 SETD2Q9BYW2 2564 aaPredicted RBP9.29□□□□□ -0.92
LIN54-201ENST00000340417 CRIP1P50238 77 aa9.28□□□□□ -0.92
LIN54-201ENST00000340417 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
LIN54-201ENST00000340417 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
LIN54-201ENST00000340417 HIGD2AQ9BW72 106 aa9.28□□□□□ -0.92
LIN54-201ENST00000340417 MDFIQ99750 246 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms