RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CTSGP08311 255 aa6.21□□□□□ -1.42
TDP1-201ENST00000335725 SUMO4Q6EEV6 95 aa6.21□□□□□ -1.42
TDP1-201ENST00000335725 TRAV22A0A0B4J277 110 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 A0A087WYN8 130 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 LECT2O14960 151 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 RPL11P62913 178 aaKnown RBP6.2□□□□□ -1.42
TDP1-201ENST00000335725 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 MRGPRG-AS1Q2M3A8 158 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 LINC00269Q8N2A0 174 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 ZNRD1Q9P1U0 126 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 SMAD5-AS1Q9Y6J3 95 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 DOCK10Q96BY6 2186 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 NAV3Q8IVL0 2385 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 IGHV1OR15-1A0A075B7D0 117 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 FOLR3P41439 243 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
TDP1-201ENST00000335725 PLXNB1O43157 2135 aa6.19□□□□□ -1.42
TDP1-201ENST00000335725 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
TDP1-201ENST00000335725 HAMPP81172 84 aa6.19□□□□□ -1.42
TDP1-201ENST00000335725 Q8N3U1 123 aa6.19□□□□□ -1.42
TDP1-201ENST00000335725 ARHGAP32A7KAX9 2087 aa6.19□□□□□ -1.42
TDP1-201ENST00000335725 KIF25-AS1Q9Y6Z4 181 aa6.19□□□□□ -1.42
TDP1-201ENST00000335725 Q8NA96 180 aa6.18□□□□□ -1.42
TDP1-201ENST00000335725 Q9H8V8 135 aa6.18□□□□□ -1.42
TDP1-201ENST00000335725 LINC00315P59091 139 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 IGFL3Q6UXB1 125 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 DIRC1Q969H9 104 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 LINC01560Q8TB33 94 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 DEFB104AQ8WTQ1 72 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 RPL36AP83881 106 aaKnown RBP6.17□□□□□ -1.42
TDP1-201ENST00000335725 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
TDP1-201ENST00000335725 ZNF576Q9H609 170 aa6.17□□□□□ -1.42
TDP1-201ENST00000335725 SERTAD4-AS1Q5TG53 156 aa6.16□□□□□ -1.42
TDP1-201ENST00000335725 A8MUN3 132 aa6.16□□□□□ -1.42
TDP1-201ENST00000335725 RFPL3SP0C7P2 107 aa6.16□□□□□ -1.42
TDP1-201ENST00000335725 IGKV2-29A2NJV5 120 aaPredicted RBP6.16□□□□□ -1.42
TDP1-201ENST00000335725 NKAPP1Q8N9T2 125 aa6.16□□□□□ -1.42
TDP1-201ENST00000335725 C5orf67F2Z3F1 127 aa6.15□□□□□ -1.42
TDP1-201ENST00000335725 BPY2O14599 106 aa6.15□□□□□ -1.42
TDP1-201ENST00000335725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.15□□□□□ -1.42
TDP1-201ENST00000335725 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
TDP1-201ENST00000335725 BBC3Q96PG8 261 aaPredicted RBP6.15□□□□□ -1.42
TDP1-201ENST00000335725 BRWD1Q9NSI6 2320 aa6.15□□□□□ -1.42
TDP1-201ENST00000335725 C11orf72Q8NBR9 251 aa6.15□□□□□ -1.42
TDP1-201ENST00000335725 ZNF318Q5VUA4 2279 aa6.15□□□□□ -1.43
TDP1-201ENST00000335725 SPATA3Q8NHX4 192 aa6.15□□□□□ -1.43
TDP1-201ENST00000335725 GAFA1Q96PS6 74 aa6.15□□□□□ -1.43
TDP1-201ENST00000335725 RNF5Q99942 180 aa6.15□□□□□ -1.43
TDP1-201ENST00000335725 SDK2Q58EX2 2172 aa6.14□□□□□ -1.43
TDP1-201ENST00000335725 PDE6GP18545 87 aa6.14□□□□□ -1.43
TDP1-201ENST00000335725 ESM1Q9NQ30 184 aa6.14□□□□□ -1.43
TDP1-201ENST00000335725 MED13Q9UHV7 2174 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 IGHV3-72A0A0B4J1Y9 119 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 A6NN06 94 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 RNASE3P12724 160 aaKnown RBP6.13□□□□□ -1.43
TDP1-201ENST00000335725 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 CYP4F30PQ9H0H9 118 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 GNLYP22749 145 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 MNX1P50219 401 aaPredicted RBP6.13□□□□□ -1.43
TDP1-201ENST00000335725 DEFB133Q30KQ1 61 aa6.13□□□□□ -1.43
TDP1-201ENST00000335725 IGLV5-45A0A087WSX0 123 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 HCG22E2RYF7 251 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 MALRD1Q5VYJ5 2156 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 A0A087WWL8 130 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 TRBV10-1A0A0K0K1A3 114 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 C16orf90A8MZG2 172 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 M0QY20 66 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 DEFB108BQ8NET1 73 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 SLPIP03973 132 aa6.12□□□□□ -1.43
TDP1-201ENST00000335725 IGLV5-39A0A0G2JS06 123 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 PRR9Q5T870 116 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 PLCE1Q9P212 2302 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 DNAH12Q6ZR08 3092 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 LINC00337Q8N6G1 96 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 GNRH2O43555 120 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 TFF2Q03403 129 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 ZFAND2AQ8N6M9 145 aa6.11□□□□□ -1.43
TDP1-201ENST00000335725 CCL3L1P16619 93 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 RNF186Q9NXI6 227 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 IGLV11-55A0A075B6I3 123 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 IGKV3-15P01624 115 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 Q5VV11 94 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 S4R3C0 116 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 IGHV1-3A0A0C4DH29 117 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 PSCAO43653 123 aa6.1□□□□□ -1.43
TDP1-201ENST00000335725 Q6ZQT0 140 aa6.09□□□□□ -1.43
TDP1-201ENST00000335725 Q6ZTI0 123 aa6.09□□□□□ -1.43
TDP1-201ENST00000335725 C19orf54Q5BKX5 351 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms