RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 RNASE3P12724 160 aaKnown RBP8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 ATG2AQ2TAZ0 1938 aa8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 CEP290O15078 2479 aa8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 Q6ZSV7 163 aa8.1□□□□□ -1.11
SNRNP200-201ENST00000323853 C2orf91Q6ZV80 131 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 C11orf21Q9P2W6 132 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 TRBV6-8A0A0A6YYG3 113 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 IBA57-AS1B1ANH7 110 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 CHKB-CPT1BH3BT56 60 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 B9D2Q9BPU9 175 aa8.09□□□□□ -1.11
SNRNP200-201ENST00000323853 IGLV1-40P01703 118 aa8.08□□□□□ -1.12
SNRNP200-201ENST00000323853 NDUFV3P56181 108 aaKnown RBP8.08□□□□□ -1.12
SNRNP200-201ENST00000323853 C5orf47Q569G3 176 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 PIK3CD-AS1Q5SR53 167 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 C9orf85Q96MD7 179 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 KLLNB2CW77 178 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 TIMM17BO60830 172 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 RNF183Q96D59 192 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 SLPIP03973 132 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
SNRNP200-201ENST00000323853 PRB2P02812 416 aaPredicted RBP8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 DIDO1Q9BTC0 2240 aaKnown RBP8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 C14orf177Q52M58 125 aa8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 CRYGDP07320 174 aa8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 C18orf65Q6ZTR6 163 aa8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
SNRNP200-201ENST00000323853 RTTNQ86VV8 2226 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 COL5A1P20908 1838 aaPredicted RBP8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 A8MZ25 164 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 NDUFC2O95298 119 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 FAM110AQ9BQ89 295 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 MIFP14174 115 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 PCDH15Q96QU1 1955 aa8.05□□□□□ -1.12
SNRNP200-201ENST00000323853 CHD3Q12873 2000 aaKnown RBP8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 LINC00482Q8N8I6 264 aa8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 MAP1BP46821 2468 aaKnown RBP8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 MRPS12O15235 138 aaKnown RBP8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 DCANP1Q8TF63 244 aa8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 H0Y9J4 135 aa8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 Q6ZS46 218 aa8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 ATP5EP2Q5VTU8 51 aa8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
SNRNP200-201ENST00000323853 MRPS36P82909 103 aaKnown RBP8.03□□□□□ -1.12
SNRNP200-201ENST00000323853 BPY2O14599 106 aa8.03□□□□□ -1.12
SNRNP200-201ENST00000323853 UBE2D1P51668 147 aa8.03□□□□□ -1.12
SNRNP200-201ENST00000323853 INAFM1C9JVW0 142 aa8.03□□□□□ -1.12
SNRNP200-201ENST00000323853 DEFB131BA0A096LNP1 70 aa8.03□□□□□ -1.12
SNRNP200-201ENST00000323853 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
SNRNP200-201ENST00000323853 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.12
SNRNP200-201ENST00000323853 HILS1P60008 231 aa8.02□□□□□ -1.12
SNRNP200-201ENST00000323853 BBC3Q96PG8 261 aaPredicted RBP8.02□□□□□ -1.12
SNRNP200-201ENST00000323853 TPRP12270 2363 aaKnown RBP8.02□□□□□ -1.12
SNRNP200-201ENST00000323853 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
SNRNP200-201ENST00000323853 Q8N976 141 aa8.02□□□□□ -1.13
SNRNP200-201ENST00000323853 LINC00310P59036 64 aa8.02□□□□□ -1.13
SNRNP200-201ENST00000323853 ENHOQ6UWT2 76 aa8.02□□□□□ -1.13
SNRNP200-201ENST00000323853 LOC100131303A0A0U1RQF7 123 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 CPAMD8Q8IZJ3 1885 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 C3orf22Q8N5N4 141 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 PCNX3Q9H6A9 2034 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 UQCRQO14949 82 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 ARHGAP21Q5T5U3 1957 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 FAM19A1Q7Z5A9 133 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 MED13Q9UHV7 2174 aa8.01□□□□□ -1.13
SNRNP200-201ENST00000323853 GTF3C1Q12789 2109 aa8□□□□□ -1.13
SNRNP200-201ENST00000323853 MALRD1Q5VYJ5 2156 aa8□□□□□ -1.13
SNRNP200-201ENST00000323853 CDSNQ15517 529 aa8□□□□□ -1.13
SNRNP200-201ENST00000323853 RBX1P62877 108 aa8□□□□□ -1.13
SNRNP200-201ENST00000323853 IL17DQ8TAD2 202 aa8□□□□□ -1.13
SNRNP200-201ENST00000323853 LINC00959A0A1B0GUT2 108 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 CD164L2Q6UWJ8 174 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 EDN2P20800 178 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 KIAA1549Q9HCM3 1950 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 LST1O00453 97 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 LY6G6DO95868 133 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 PRM2P04554 102 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 SCXQ7RTU7 201 aa7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
SNRNP200-201ENST00000323853 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 WFDC10AQ9H1F0 79 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 DOCK7Q96N67 2140 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 LINC01006Q8NI28 216 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 USF3Q68DE3 2245 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 INTS1Q8N201 2190 aaKnown RBP7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 C6orf99Q4VX62 202 aa7.98□□□□□ -1.13
SNRNP200-201ENST00000323853 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
SNRNP200-201ENST00000323853 SHANK1Q9Y566 2161 aa7.97□□□□□ -1.13
SNRNP200-201ENST00000323853 UBE2D3P61077 147 aa7.97□□□□□ -1.13
SNRNP200-201ENST00000323853 UBE2D2P62837 147 aa7.97□□□□□ -1.13
SNRNP200-201ENST00000323853 SMIM11BQ8TCY0 68 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms