RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 OR10J6PQ8NGY7 276 aa5.93□□□□□ -1.46
CHD6-201ENST00000309279 RNF185Q96GF1 192 aa5.93□□□□□ -1.46
CHD6-201ENST00000309279 ARL2-SNX15V9GYD0 113 aa5.93□□□□□ -1.46
CHD6-201ENST00000309279 hDV102S1A0JD36 115 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 RBAKDNA6NC62 111 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 TMEM262E9PQX1 116 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 IGKV3-20P01619 116 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 SLC25A5P05141 298 aaKnown RBP5.92□□□□□ -1.46
CHD6-201ENST00000309279 CSN1S1P47710 185 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 PRR3P79522 188 aaKnown RBP5.92□□□□□ -1.46
CHD6-201ENST00000309279 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 DEFB135Q30KP9 77 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 ODF3Q96PU9 254 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 SLC35B3Q9H1N7 401 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 ZNF727A8MUV8 499 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 EPM2AB3EWF7 344 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 MT-ND6P03923 174 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 PRB4P10163 310 aaPredicted RBP5.92□□□□□ -1.46
CHD6-201ENST00000309279 CMTM2Q8TAZ6 248 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 LINC00526Q96FQ7 95 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 VGLL1Q99990 258 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 AGPAT4-IT1Q9H0P7 198 aa5.92□□□□□ -1.46
CHD6-201ENST00000309279 IGKV2-40A0A087WW87 121 aaPredicted RBP5.91□□□□□ -1.46
CHD6-201ENST00000309279 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 IGKV2D-40P01614 121 aaPredicted RBP5.91□□□□□ -1.46
CHD6-201ENST00000309279 TRGC2P03986 189 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 CCL20P78556 96 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 ERCC8Q13216 396 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 SPINK13Q1W4C9 94 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 C10orf126Q8N4M7 172 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 LINC00337Q8N6G1 96 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 XCL2Q9UBD3 114 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 EPDR1Q9UM22 224 aa5.91□□□□□ -1.46
CHD6-201ENST00000309279 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 TRBV7-6A0A0J9YX20 115 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 KLLNB2CW77 178 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 TCRAP04437 139 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 CRISP2P16562 243 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 FXYD7P58549 80 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 TMEM75Q8N9X5 138 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 IMUPQ9GZP8 106 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 C11orf68Q9H3H3 251 aaKnown RBP5.9□□□□□ -1.46
CHD6-201ENST00000309279 LENEPQ9Y5L5 61 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 U3KQK5 164 aa5.9□□□□□ -1.46
CHD6-201ENST00000309279 FAM229AH3BQW9 127 aa5.89□□□□□ -1.47
CHD6-201ENST00000309279 UQCRQO14949 82 aa5.89□□□□□ -1.47
CHD6-201ENST00000309279 IGLV2-11P01706 119 aa5.89□□□□□ -1.47
CHD6-201ENST00000309279 RPS10P46783 165 aaKnown RBP5.89□□□□□ -1.47
CHD6-201ENST00000309279 HINT1P49773 126 aaPredicted RBP5.89□□□□□ -1.47
CHD6-201ENST00000309279 ZNF138P52744 262 aa5.89□□□□□ -1.47
CHD6-201ENST00000309279 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
CHD6-201ENST00000309279 MANBALQ9NQG1 85 aa5.89□□□□□ -1.47
CHD6-201ENST00000309279 TRAV12-2A0A075B6T6 113 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 MUC21A0A0G2JKD1 596 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 INSP01308 110 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 IGLC3P0DOY3 106 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 ZFAND2AQ8N6M9 145 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 CYB561D1Q8N8Q1 229 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 C18orf15Q96N68 181 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 TXNDC17Q9BRA2 123 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 TRAV8-1A0A0A6YYK1 113 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 F8W1H4 67 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 ZNF324O75467 553 aaPredicted RBP5.88□□□□□ -1.47
CHD6-201ENST00000309279 RBMY1FQ15415 496 aaKnown RBP5.88□□□□□ -1.47
CHD6-201ENST00000309279 SLC25A34Q6PIV7 304 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 TMEM256Q8N2U0 113 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 NEXN-AS1Q8NBZ9 246 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 Q8TAT8 98 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 TVP23CQ96ET8 276 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 PGLYRP4Q96LB8 373 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 FAM218AQ96MZ4 157 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 CSMD3Q7Z407 3707 aa5.88□□□□□ -1.47
CHD6-201ENST00000309279 TRBV20-1A0A075B6N2 111 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 C11orf94C9JXX5 98 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 M0R2P5 195 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 PEX7O00628 323 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 TRGC1P0CF51 173 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 MIFP14174 115 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 Q8NAQ8 132 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 OR10G8Q8NGN5 311 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 LINC00479Q96M42 142 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 RPS10P5Q9NQ39 176 aa5.87□□□□□ -1.47
CHD6-201ENST00000309279 TRBV6-1A0A0K0K1D8 114 aa5.86□□□□□ -1.47
CHD6-201ENST00000309279 CRYGAP11844 174 aa5.86□□□□□ -1.47
CHD6-201ENST00000309279 PSMB2P49721 201 aa5.86□□□□□ -1.47
CHD6-201ENST00000309279 PRR9Q5T870 116 aa5.86□□□□□ -1.47
CHD6-201ENST00000309279 CHCHD10Q8WYQ3 142 aaPredicted RBP5.86□□□□□ -1.47
CHD6-201ENST00000309279 KCNS1Q96KK3 526 aa5.86□□□□□ -1.47
CHD6-201ENST00000309279 EIF5A2Q9GZV4 153 aaKnown RBP5.86□□□□□ -1.47
CHD6-201ENST00000309279 C11orf21Q9P2W6 132 aa5.86□□□□□ -1.47
CHD6-201ENST00000309279 TRAV12-3A0A0B4J271 114 aa5.85□□□□□ -1.47
CHD6-201ENST00000309279 C7orf77A4D0Y5 90 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms