RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 NFE4Q86UQ8 179 aa12.71□□□□□ -0.37
CNTNAP3-201ENST00000297668 MBD6Q96DN6 1003 aa12.71□□□□□ -0.38
CNTNAP3-201ENST00000297668 TMEM256-PLSCR3K7ERE1 68 aa12.7□□□□□ -0.38
CNTNAP3-201ENST00000297668 C1orf229Q6ZS94 237 aaPredicted RBP12.7□□□□□ -0.38
CNTNAP3-201ENST00000297668 UQCRQO14949 82 aa12.7□□□□□ -0.38
CNTNAP3-201ENST00000297668 HIGD2BQ4VC39 106 aa12.7□□□□□ -0.38
CNTNAP3-201ENST00000297668 MYO9AB2RTY4 2548 aa12.7□□□□□ -0.38
CNTNAP3-201ENST00000297668 ABCA2Q9BZC7 2435 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 P0DMU3 169 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 FAM231AP0DMU4 169 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 FAM231CP0DMU5 169 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 CRYGBP07316 175 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
CNTNAP3-201ENST00000297668 TCL1BO95988 128 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 UBE2AP49459 152 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 INSL3P51460 131 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 ODF3Q96PU9 254 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 IGF1P05019 195 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 EIF4EBP1Q13541 118 aaPredicted RBP12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 WFDC9Q8NEX5 89 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 SMAD5-AS1Q9Y6J3 95 aa12.68□□□□□ -0.38
CNTNAP3-201ENST00000297668 Q6ZTI0 123 aa12.67□□□□□ -0.38
CNTNAP3-201ENST00000297668 SPANXB1Q9NS25 103 aaPredicted RBP12.67□□□□□ -0.38
CNTNAP3-201ENST00000297668 K7EQG2 157 aa12.67□□□□□ -0.38
CNTNAP3-201ENST00000297668 PDE6GP18545 87 aa12.66□□□□□ -0.38
CNTNAP3-201ENST00000297668 PRB2P02812 416 aaPredicted RBP12.66□□□□□ -0.38
CNTNAP3-201ENST00000297668 LINC00643Q86TS7 51 aa12.66□□□□□ -0.38
CNTNAP3-201ENST00000297668 HIST2H2BDQ6DRA6 164 aa12.66□□□□□ -0.38
CNTNAP3-201ENST00000297668 C22orf34Q6ZV56 151 aa12.66□□□□□ -0.38
CNTNAP3-201ENST00000297668 DNAJC9-AS1A6NH13 148 aa12.65□□□□□ -0.38
CNTNAP3-201ENST00000297668 NEXN-AS1Q8NBZ9 246 aa12.65□□□□□ -0.38
CNTNAP3-201ENST00000297668 IGKV2D-26A0A0A0MRZ7 120 aa12.65□□□□□ -0.38
CNTNAP3-201ENST00000297668 C14orf132Q9NPU4 83 aa12.65□□□□□ -0.38
CNTNAP3-201ENST00000297668 C1orf195Q5TG92 126 aa12.64□□□□□ -0.39
CNTNAP3-201ENST00000297668 ZFAND2AQ8N6M9 145 aa12.64□□□□□ -0.39
CNTNAP3-201ENST00000297668 COX7BP24311 80 aa12.64□□□□□ -0.39
CNTNAP3-201ENST00000297668 CDKN2A-AS1Q9UH64 79 aa12.64□□□□□ -0.39
CNTNAP3-201ENST00000297668 CHKB-CPT1BH3BT56 60 aa12.63□□□□□ -0.39
CNTNAP3-201ENST00000297668 FSTL3O95633 263 aa12.62□□□□□ -0.39
CNTNAP3-201ENST00000297668 UFSP1Q6NVU6 142 aa12.62□□□□□ -0.39
CNTNAP3-201ENST00000297668 LINC00467Q9BRT7 94 aa12.62□□□□□ -0.39
CNTNAP3-201ENST00000297668 PIEZO1Q92508 2521 aa12.62□□□□□ -0.39
CNTNAP3-201ENST00000297668 C20orf173Q96LM9 149 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 PCDH15Q96QU1 1955 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 ZNF22P17026 224 aaPredicted RBP12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 EBI3Q14213 229 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 SMIM9A6NGZ8 99 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 CRIP1P50238 77 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
CNTNAP3-201ENST00000297668 C3orf22Q8N5N4 141 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 TNRC6BQ9UPQ9 1833 aaKnown RBP12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 TP73-AS1Q9UF72 201 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 ADAMTS9Q9P2N4 1935 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 IGLV4-3A0A075B6K6 122 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 DENND4AQ7Z401 1863 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 PCNX3Q9H6A9 2034 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 FAM240AA0A1B0GVK7 77 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 DEFB114Q30KQ6 69 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 FAM110AQ9BQ89 295 aa12.6□□□□□ -0.39
CNTNAP3-201ENST00000297668 REG3AQ06141 175 aa12.59□□□□□ -0.39
CNTNAP3-201ENST00000297668 WFDC11Q8NEX6 87 aa12.59□□□□□ -0.39
CNTNAP3-201ENST00000297668 C19orf84I3L1E1 186 aa12.59□□□□□ -0.39
CNTNAP3-201ENST00000297668 LRRC75A-AS1Q8N1F1 130 aa12.59□□□□□ -0.39
CNTNAP3-201ENST00000297668 LY6LH3BQJ8 138 aa12.58□□□□□ -0.4
CNTNAP3-201ENST00000297668 FAM222AQ5U5X8 452 aa12.58□□□□□ -0.4
CNTNAP3-201ENST00000297668 NCOR2Q9Y618 2525 aa12.58□□□□□ -0.4
CNTNAP3-201ENST00000297668 Q6YL49 198 aa12.58□□□□□ -0.4
CNTNAP3-201ENST00000297668 PIEZO2Q9H5I5 2752 aa12.57□□□□□ -0.4
CNTNAP3-201ENST00000297668 TMEM223A0PJW6 202 aa12.57□□□□□ -0.4
CNTNAP3-201ENST00000297668 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
CNTNAP3-201ENST00000297668 TEX49A0A1B0GTD5 131 aa12.57□□□□□ -0.4
CNTNAP3-201ENST00000297668 NDUFA7O95182 113 aa12.57□□□□□ -0.4
CNTNAP3-201ENST00000297668 M0QY20 66 aa12.56□□□□□ -0.4
CNTNAP3-201ENST00000297668 MAPKAPK5-AS1Q8N8E1 139 aa12.56□□□□□ -0.4
CNTNAP3-201ENST00000297668 CHCHD10Q8WYQ3 142 aaPredicted RBP12.56□□□□□ -0.4
CNTNAP3-201ENST00000297668 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 TRAV23DV6A0A075B6W5 121 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 DSCAMO60469 2012 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 BPY2O14599 106 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 LYRM9A8MSI8 78 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 U3KQK5 164 aa12.55□□□□□ -0.4
CNTNAP3-201ENST00000297668 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 CCDC179H3BU77 68 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 C11orf45Q8TAV5 145 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 TMEM131Q92545 1883 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 H0Y9J4 135 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 H7C423 109 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 C4orf48Q5BLP8 95 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 FAM236DA0A1B0GTK5 79 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 FAM236CP0DP71 79 aa12.54□□□□□ -0.4
CNTNAP3-201ENST00000297668 IGHV4-31P0DP07 118 aa12.53□□□□□ -0.4
CNTNAP3-201ENST00000297668 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
CNTNAP3-201ENST00000297668 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms