RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 LINC00467Q9BRT7 94 aa10.82□□□□□ -0.68
CCT3-201ENST00000295688 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
CCT3-201ENST00000295688 IFITM1P13164 125 aa10.82□□□□□ -0.68
CCT3-201ENST00000295688 TEX29Q8N6K0 151 aa10.82□□□□□ -0.68
CCT3-201ENST00000295688 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
CCT3-201ENST00000295688 PRRC2AP48634 2157 aaKnown RBP10.81□□□□□ -0.68
CCT3-201ENST00000295688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.686e-8■■■■□ 19.3
CCT3-201ENST00000295688 SVEP1Q4LDE5 3571 aa10.81□□□□□ -0.68
CCT3-201ENST00000295688 TRAV8-3A0A0A6YYJ7 113 aa10.81□□□□□ -0.68
CCT3-201ENST00000295688 PEMTQ9UBM1 199 aa10.81□□□□□ -0.68
CCT3-201ENST00000295688 DOPEY2Q9Y3R5 2298 aa10.81□□□□□ -0.68
CCT3-201ENST00000295688 TRIAP1O43715 76 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 PROK1P58294 105 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 NTN5Q8WTR8 489 aaPredicted RBP10.8□□□□□ -0.68
CCT3-201ENST00000295688 ZNF702PQ9H963 129 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 NHLRC4P0CG21 123 aaPredicted RBP10.8□□□□□ -0.68
CCT3-201ENST00000295688 Q6YL49 198 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 ANAPC13Q9BS18 74 aa10.8□□□□□ -0.68
CCT3-201ENST00000295688 ADARB2-AS1A8MUL3 147 aa10.79□□□□□ -0.68
CCT3-201ENST00000295688 TIRAPP58753 221 aa10.79□□□□□ -0.68
CCT3-201ENST00000295688 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
CCT3-201ENST00000295688 BEX4Q9NWD9 120 aaPredicted RBP10.79□□□□□ -0.68
CCT3-201ENST00000295688 H3BT86 120 aa10.78□□□□□ -0.68
CCT3-201ENST00000295688 GAGE5Q13069 117 aa10.78□□□□□ -0.68
CCT3-201ENST00000295688 GAGE6Q13070 117 aa10.78□□□□□ -0.68
CCT3-201ENST00000295688 BEAN1Q3B7T3 259 aa10.78□□□□□ -0.68
CCT3-201ENST00000295688 ADAMTSL4-AS1Q5T5F5 129 aa10.78□□□□□ -0.68
CCT3-201ENST00000295688 LINC01587Q99440 93 aa10.77□□□□□ -0.68
CCT3-201ENST00000295688 RBMY1BA6NDE4 496 aaKnown RBP10.77□□□□□ -0.69
CCT3-201ENST00000295688 RBMY1EA6NEQ0 496 aaKnown RBP10.77□□□□□ -0.69
CCT3-201ENST00000295688 RS1O15537 224 aa10.77□□□□□ -0.69
CCT3-201ENST00000295688 SNCGO76070 127 aa10.77□□□□□ -0.69
CCT3-201ENST00000295688 RBMY1DP0C7P1 496 aaKnown RBP10.77□□□□□ -0.69
CCT3-201ENST00000295688 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
CCT3-201ENST00000295688 UBE2WQ96B02 151 aa10.77□□□□□ -0.69
CCT3-201ENST00000295688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
CCT3-201ENST00000295688 TRAV8-4A0A0B4J246 113 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
CCT3-201ENST00000295688 SLURP1P55000 103 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
CCT3-201ENST00000295688 RNASE13Q5GAN3 156 aaKnown RBP10.76□□□□□ -0.69
CCT3-201ENST00000295688 C2orf82Q6UX34 121 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 Q6ZSN1 163 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 IGLV5-45A0A087WSX0 123 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 NDUFA1O15239 70 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 FSHBP01225 129 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 INSP01308 110 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 DGAT2L7PQ6IED9 249 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 COPS9Q8WXC6 57 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 NACAE9PAV3 2078 aa10.76□□□□□ -0.69
CCT3-201ENST00000295688 A0A096LNT2 108 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 GAGE2BQ13066 116 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 C11orf72Q8NBR9 251 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 ZFHX3Q15911 3703 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 NDUFV3P56181 108 aaKnown RBP10.75□□□□□ -0.69
CCT3-201ENST00000295688 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
CCT3-201ENST00000295688 CSPG4Q6UVK1 2322 aa10.74□□□□□ -0.69
CCT3-201ENST00000295688 SORL1Q92673 2214 aa10.74□□□□□ -0.69
CCT3-201ENST00000295688 DYNLRB2Q8TF09 96 aa10.74□□□□□ -0.69
CCT3-201ENST00000295688 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
CCT3-201ENST00000295688 FAM240AA0A1B0GVK7 77 aa10.73□□□□□ -0.69
CCT3-201ENST00000295688 H7C423 109 aa10.73□□□□□ -0.69
CCT3-201ENST00000295688 LST1O00453 97 aa10.73□□□□□ -0.69
CCT3-201ENST00000295688 HERVK_113P63121 156 aa10.73□□□□□ -0.69
CCT3-201ENST00000295688 CDKN2A-AS1Q9UH64 79 aa10.73□□□□□ -0.69
CCT3-201ENST00000295688 TEX49A0A1B0GTD5 131 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 CRLF1O75462 422 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 Q8N2B8 174 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 C4orf3Q8WVX3 66 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 Q9UF83 564 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 DEFB136Q30KP8 78 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
CCT3-201ENST00000295688 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
CCT3-201ENST00000295688 A8MZ25 164 aa10.71□□□□□ -0.69
CCT3-201ENST00000295688 PRM2P04554 102 aa10.71□□□□□ -0.69
CCT3-201ENST00000295688 FAM19A3Q7Z5A8 133 aa10.71□□□□□ -0.69
CCT3-201ENST00000295688 NPC2P61916 151 aa10.7□□□□□ -0.7
CCT3-201ENST00000295688 NRGNQ92686 78 aa10.7□□□□□ -0.7
CCT3-201ENST00000295688 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
CCT3-201ENST00000295688 DEFB114Q30KQ6 69 aa10.7□□□□□ -0.7
CCT3-201ENST00000295688 C18orf65Q6ZTR6 163 aa10.69□□□□□ -0.7
CCT3-201ENST00000295688 CSDC2Q9Y534 153 aaKnown RBP10.69□□□□□ -0.7
CCT3-201ENST00000295688 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
CCT3-201ENST00000295688 CELSR1Q9NYQ6 3014 aa10.69□□□□□ -0.7
CCT3-201ENST00000295688 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
CCT3-201ENST00000295688 SPTBN4Q9H254 2564 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 TRBV10-1A0A0K0K1A3 114 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 IGHV4-31P0DP07 118 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 LINC00308Q8TCZ7 52 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 SPG11Q96JI7 2443 aa10.68□□□□□ -0.7
CCT3-201ENST00000295688 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms