RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 LINC01620Q4KN68 170 aa12.99□□□□□ -0.33
SHANK1-201ENST00000293441 P0C879 139 aa12.99□□□□□ -0.33
SHANK1-201ENST00000293441 A0A1B0GX51 115 aa12.98□□□□□ -0.33
SHANK1-201ENST00000293441 COA6Q5JTJ3 125 aaKnown RBP12.98□□□□□ -0.33
SHANK1-201ENST00000293441 C11orf1Q9H5F2 150 aa12.98□□□□□ -0.33
SHANK1-201ENST00000293441 LINC00467Q9BRT7 94 aa12.98□□□□□ -0.33
SHANK1-201ENST00000293441 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
SHANK1-201ENST00000293441 CHCHD10Q8WYQ3 142 aaPredicted RBP12.98□□□□□ -0.33
SHANK1-201ENST00000293441 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
SHANK1-201ENST00000293441 C5orf47Q569G3 176 aa12.98□□□□□ -0.33
SHANK1-201ENST00000293441 Q6ZPA2 131 aa12.98□□□□□ -0.33
SHANK1-201ENST00000293441 C14orf132Q9NPU4 83 aa12.97□□□□□ -0.33
SHANK1-201ENST00000293441 MP68P56378 58 aa12.97□□□□□ -0.33
SHANK1-201ENST00000293441 LY6LH3BQJ8 138 aa12.97□□□□□ -0.33
SHANK1-201ENST00000293441 WFDC9Q8NEX5 89 aa12.97□□□□□ -0.33
SHANK1-201ENST00000293441 CRYGBP07316 175 aa12.96□□□□□ -0.33
SHANK1-201ENST00000293441 GDF5OSQ5U4N7 250 aa12.96□□□□□ -0.33
SHANK1-201ENST00000293441 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.96□□□□□ -0.33
SHANK1-201ENST00000293441 BDP1A6H8Y1 2624 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 PSMB8P28062 276 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 CITED1Q99966 193 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 UFSP1Q6NVU6 142 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 JMJD7-PLA2G4BH0Y9G9 81 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 TMEM256-PLSCR3K7ERE1 68 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 FSTL3O95633 263 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 ZNF702PQ9H963 129 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
SHANK1-201ENST00000293441 A0A087WZ39 114 aa12.94□□□□□ -0.34
SHANK1-201ENST00000293441 MIFP14174 115 aa12.94□□□□□ -0.34
SHANK1-201ENST00000293441 NEXN-AS1Q8NBZ9 246 aa12.94□□□□□ -0.34
SHANK1-201ENST00000293441 C18orf65Q6ZTR6 163 aa12.94□□□□□ -0.34
SHANK1-201ENST00000293441 A0A096LNI7 61 aa12.93□□□□□ -0.34
SHANK1-201ENST00000293441 TMEM258P61165 79 aa12.93□□□□□ -0.34
SHANK1-201ENST00000293441 IGLV2-18A0A075B6J9 118 aa12.93□□□□□ -0.34
SHANK1-201ENST00000293441 FAM19A1Q7Z5A9 133 aa12.93□□□□□ -0.34
SHANK1-201ENST00000293441 ZFAND3Q9H8U3 227 aa12.93□□□□□ -0.34
SHANK1-201ENST00000293441 IGKV2D-26A0A0A0MRZ7 120 aa12.92□□□□□ -0.34
SHANK1-201ENST00000293441 EBI3Q14213 229 aa12.92□□□□□ -0.34
SHANK1-201ENST00000293441 MIAQ16674 131 aa12.92□□□□□ -0.34
SHANK1-201ENST00000293441 PLA2G2AP14555 144 aa12.92□□□□□ -0.34
SHANK1-201ENST00000293441 DSCAML1Q8TD84 2053 aa12.92□□□□□ -0.34
SHANK1-201ENST00000293441 CFAP126Q5VTH2 177 aa12.92□□□□□ -0.34
SHANK1-201ENST00000293441 M0R2N4 97 aa12.91□□□□□ -0.34
SHANK1-201ENST00000293441 IGLV2-8P01709 118 aa12.91□□□□□ -0.34
SHANK1-201ENST00000293441 PROK1P58294 105 aa12.91□□□□□ -0.34
SHANK1-201ENST00000293441 WFDC2Q14508 124 aa12.91□□□□□ -0.34
SHANK1-201ENST00000293441 PSMG3-AS1Q96PY0 264 aa12.91□□□□□ -0.34
SHANK1-201ENST00000293441 LINC01006Q8NI28 216 aa12.91□□□□□ -0.34
SHANK1-201ENST00000293441 EIF4EBP1Q13541 118 aaPredicted RBP12.9□□□□□ -0.34
SHANK1-201ENST00000293441 CRIP3Q6Q6R5 217 aa12.9□□□□□ -0.34
SHANK1-201ENST00000293441 TRBV10-2A0A0K0K1G8 114 aa12.9□□□□□ -0.34
SHANK1-201ENST00000293441 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
SHANK1-201ENST00000293441 WFDC10AQ9H1F0 79 aa12.9□□□□□ -0.34
SHANK1-201ENST00000293441 IGLC6P0CF74 106 aa12.89□□□□□ -0.35
SHANK1-201ENST00000293441 A0A0J9YXY3 114 aa12.89□□□□□ -0.35
SHANK1-201ENST00000293441 BBC3Q96PG8 261 aaPredicted RBP12.89□□□□□ -0.35
SHANK1-201ENST00000293441 A0A1B0GXF2 115 aa12.88□□□□□ -0.35
SHANK1-201ENST00000293441 TRAV10A0A0B4J240 114 aa12.88□□□□□ -0.35
SHANK1-201ENST00000293441 H7C423 109 aa12.88□□□□□ -0.35
SHANK1-201ENST00000293441 TEN1Q86WV5 123 aa12.88□□□□□ -0.35
SHANK1-201ENST00000293441 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
SHANK1-201ENST00000293441 Q6ZS46 218 aa12.87□□□□□ -0.35
SHANK1-201ENST00000293441 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
SHANK1-201ENST00000293441 PRR14LQ5THK1 2151 aa12.87□□□□□ -0.35
SHANK1-201ENST00000293441 FAM236AA0A1B0GUQ0 79 aa12.86□□□□□ -0.35
SHANK1-201ENST00000293441 FAM236BA0A1B0GV22 79 aa12.86□□□□□ -0.35
SHANK1-201ENST00000293441 CDSNQ15517 529 aa12.86□□□□□ -0.35
SHANK1-201ENST00000293441 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
SHANK1-201ENST00000293441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.85□□□□□ -0.35
SHANK1-201ENST00000293441 SMR3AQ99954 134 aa12.85□□□□□ -0.35
SHANK1-201ENST00000293441 SPANXCQ9NY87 97 aa12.85□□□□□ -0.35
SHANK1-201ENST00000293441 Q8N976 141 aa12.84□□□□□ -0.35
SHANK1-201ENST00000293441 IGLV4-3A0A075B6K6 122 aa12.84□□□□□ -0.35
SHANK1-201ENST00000293441 IGKV4-1P06312 121 aa12.84□□□□□ -0.35
SHANK1-201ENST00000293441 XAGE1AQ9HD64 81 aa12.84□□□□□ -0.35
SHANK1-201ENST00000293441 TTC28Q96AY4 2481 aa12.84□□□□□ -0.35
SHANK1-201ENST00000293441 CRIP1P50238 77 aa12.84□□□□□ -0.35
SHANK1-201ENST00000293441 LY6G6CO95867 125 aa12.83□□□□□ -0.35
SHANK1-201ENST00000293441 MLST8Q9BVC4 326 aa12.83□□□□□ -0.35
SHANK1-201ENST00000293441 WNK1Q9H4A3 2382 aa12.83□□□□□ -0.35
SHANK1-201ENST00000293441 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
SHANK1-201ENST00000293441 ATOX1O00244 68 aa12.83□□□□□ -0.36
SHANK1-201ENST00000293441 TAX1BP3O14907 124 aa12.83□□□□□ -0.36
SHANK1-201ENST00000293441 M0QY20 66 aa12.83□□□□□ -0.36
SHANK1-201ENST00000293441 B5MCH6 92 aa12.83□□□□□ -0.36
SHANK1-201ENST00000293441 SPG11Q96JI7 2443 aa12.82□□□□□ -0.36
SHANK1-201ENST00000293441 H3BT86 120 aa12.82□□□□□ -0.36
SHANK1-201ENST00000293441 KPRPQ5T749 579 aaPredicted RBP12.82□□□□□ -0.36
SHANK1-201ENST00000293441 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 C7orf33Q8WU49 177 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 LOC100131303A0A0U1RQF7 123 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 FOXI1Q12951 378 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 TMEM223A0PJW6 202 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 PRM2P04554 102 aa12.81□□□□□ -0.36
SHANK1-201ENST00000293441 MUC22E2RYF6 1773 aaPredicted RBP12.8□□□□□ -0.36
SHANK1-201ENST00000293441 PIK3CD-AS1Q5SR53 167 aa12.8□□□□□ -0.36
SHANK1-201ENST00000293441 PTH2Q96A98 100 aa12.8□□□□□ -0.36
SHANK1-201ENST00000293441 TCL1BO95988 128 aa12.8□□□□□ -0.36
SHANK1-201ENST00000293441 DCANP1Q8TF63 244 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms