RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 C18orf65Q6ZTR6 163 aa10.78□□□□□ -0.68
TMEM47-201ENST00000275954 BAALCQ8WXS3 180 aa10.78□□□□□ -0.68
TMEM47-201ENST00000275954 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
TMEM47-201ENST00000275954 SIVA1O15304 175 aa10.78□□□□□ -0.68
TMEM47-201ENST00000275954 MALP21145 153 aa10.78□□□□□ -0.68
TMEM47-201ENST00000275954 MORN3Q6PF18 240 aaPredicted RBP10.78□□□□□ -0.68
TMEM47-201ENST00000275954 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.69
TMEM47-201ENST00000275954 PAX4O43316 350 aa10.77□□□□□ -0.69
TMEM47-201ENST00000275954 Q8N976 141 aa10.77□□□□□ -0.69
TMEM47-201ENST00000275954 C6orf226Q5I0X4 101 aa10.77□□□□□ -0.69
TMEM47-201ENST00000275954 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
TMEM47-201ENST00000275954 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
TMEM47-201ENST00000275954 SIGMAR1Q99720 223 aa10.76□□□□□ -0.69
TMEM47-201ENST00000275954 TRAV8-3A0A0A6YYJ7 113 aa10.75□□□□□ -0.69
TMEM47-201ENST00000275954 PFN2P35080 140 aa10.75□□□□□ -0.69
TMEM47-201ENST00000275954 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
TMEM47-201ENST00000275954 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
TMEM47-201ENST00000275954 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
TMEM47-201ENST00000275954 DEFB4AO15263 64 aa10.75□□□□□ -0.69
TMEM47-201ENST00000275954 ESM1Q9NQ30 184 aa10.75□□□□□ -0.69
TMEM47-201ENST00000275954 FGF6P10767 208 aa10.74□□□□□ -0.69
TMEM47-201ENST00000275954 K7EQG2 157 aa10.74□□□□□ -0.69
TMEM47-201ENST00000275954 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
TMEM47-201ENST00000275954 TOMM6Q96B49 74 aa10.74□□□□□ -0.69
TMEM47-201ENST00000275954 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
TMEM47-201ENST00000275954 APCP25054 2843 aa10.74□□□□□ -0.69
TMEM47-201ENST00000275954 NBEAL2Q6ZNJ1 2754 aa10.73□□□□□ -0.69
TMEM47-201ENST00000275954 MUC4Q99102 2169 aa10.73□□□□□ -0.69
TMEM47-201ENST00000275954 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
TMEM47-201ENST00000275954 Q6ZSV7 163 aa10.73□□□□□ -0.69
TMEM47-201ENST00000275954 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
TMEM47-201ENST00000275954 PROK1P58294 105 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 RHOHQ15669 191 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 DAND5Q8N907 189 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 IGLL5B9A064 214 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 HIVEP1P15822 2718 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 CKS1BP61024 79 aa10.72□□□□□ -0.69
TMEM47-201ENST00000275954 F5H768 121 aa10.71□□□□□ -0.69
TMEM47-201ENST00000275954 A0A0J9YY99 117 aa10.71□□□□□ -0.69
TMEM47-201ENST00000275954 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
TMEM47-201ENST00000275954 PSMB8P28062 276 aa10.71□□□□□ -0.69
TMEM47-201ENST00000275954 MAPKAPK5-AS1Q8N8E1 139 aa10.71□□□□□ -0.69
TMEM47-201ENST00000275954 PIFOQ8TCI5 191 aa10.71□□□□□ -0.69
TMEM47-201ENST00000275954 TEX48A0A1B0GUV7 120 aa10.71□□□□□ -0.7
TMEM47-201ENST00000275954 WFDC2Q14508 124 aa10.71□□□□□ -0.7
TMEM47-201ENST00000275954 Q6YL49 198 aa10.71□□□□□ -0.7
TMEM47-201ENST00000275954 NXPH4O95158 308 aa10.7□□□□□ -0.7
TMEM47-201ENST00000275954 A4D1N5 150 aa10.7□□□□□ -0.7
TMEM47-201ENST00000275954 TAL2Q16559 108 aa10.7□□□□□ -0.7
TMEM47-201ENST00000275954 MAP6D1Q9H9H5 199 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 U3KQK5 164 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 NRACQ8N912 160 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 H3BMM0 161 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 E9PLD3 99 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.69□□□□□ -0.7
TMEM47-201ENST00000275954 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 Q9H8V8 135 aa10.69□□□□□ -0.7
TMEM47-201ENST00000275954 CRPP02741 224 aa10.68□□□□□ -0.7
TMEM47-201ENST00000275954 C5orf38Q86SI9 138 aa10.68□□□□□ -0.7
TMEM47-201ENST00000275954 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
TMEM47-201ENST00000275954 LRRC75A-AS1Q8N1F1 130 aa10.68□□□□□ -0.7
TMEM47-201ENST00000275954 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
TMEM47-201ENST00000275954 TSPAN13O95857 204 aa10.68□□□□□ -0.7
TMEM47-201ENST00000275954 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
TMEM47-201ENST00000275954 MUSTN1Q8IVN3 82 aa10.67□□□□□ -0.7
TMEM47-201ENST00000275954 TMEM86BQ8N661 226 aa10.67□□□□□ -0.7
TMEM47-201ENST00000275954 IGLV1-40P01703 118 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 DAD1P61803 113 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 LINC01006Q8NI28 216 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 TMEM89A2RUT3 159 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 C2orf91Q6ZV80 131 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 Q6ZTI0 123 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
TMEM47-201ENST00000275954 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.7
TMEM47-201ENST00000275954 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.7
TMEM47-201ENST00000275954 F8W1H4 67 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.7
TMEM47-201ENST00000275954 RBMY1A1P0DJD3 496 aaKnown RBP10.65□□□□□ -0.7
TMEM47-201ENST00000275954 RBMY1CP0DJD4 496 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 XCL1P47992 114 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 HIGD1BQ9P298 99 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 FBN2P35556 2912 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 LEPROTO15243 131 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 ZNF702PQ9H963 129 aa10.65□□□□□ -0.7
TMEM47-201ENST00000275954 A0A096LNJ9 63 aa10.64□□□□□ -0.71
TMEM47-201ENST00000275954 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
TMEM47-201ENST00000275954 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
TMEM47-201ENST00000275954 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
TMEM47-201ENST00000275954 CFC1P0CG37 223 aa10.64□□□□□ -0.71
TMEM47-201ENST00000275954 SS18Q15532 418 aa10.64□□□□□ -0.71
TMEM47-201ENST00000275954 SCGB1A1P11684 91 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 LINC00482Q8N8I6 264 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 NEXN-AS1Q8NBZ9 246 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 IGLV10-54A0A075B6I4 117 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 TRBV20-1A0A075B6N2 111 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms