RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 PCP2Q8IVA1 136 aa15.21■□□□□ 0.03
GFRA3-201ENST00000274721 CHCHD7Q9BUK0 85 aa15.21■□□□□ 0.03
GFRA3-201ENST00000274721 PYGO1Q9Y3Y4 419 aa15.21■□□□□ 0.03
GFRA3-201ENST00000274721 TRBV7-3A0A075B6L6 115 aa15.21■□□□□ 0.02
GFRA3-201ENST00000274721 SMIM9A6NGZ8 99 aa15.21■□□□□ 0.02
GFRA3-201ENST00000274721 K7EQD1 137 aa15.21■□□□□ 0.02
GFRA3-201ENST00000274721 NMUP48645 174 aa15.21■□□□□ 0.02
GFRA3-201ENST00000274721 SLC25A29Q8N8R3 303 aa15.21■□□□□ 0.02
GFRA3-201ENST00000274721 TRGV2A0A075B6R0 118 aa15.2■□□□□ 0.02
GFRA3-201ENST00000274721 IGLV4-69A0A075B6H9 119 aa15.19■□□□□ 0.02
GFRA3-201ENST00000274721 ZNRF2Q8NHG8 242 aa15.19■□□□□ 0.02
GFRA3-201ENST00000274721 LINC00612Q8N6U2 182 aa15.19■□□□□ 0.02
GFRA3-201ENST00000274721 OPRPNQ99935 248 aaPredicted RBP15.19■□□□□ 0.02
GFRA3-201ENST00000274721 FBN1P35555 2871 aaKnown RBP15.18■□□□□ 0.02
GFRA3-201ENST00000274721 PRIMA1Q86XR5 153 aa15.18■□□□□ 0.02
GFRA3-201ENST00000274721 PHLDA1Q8WV24 401 aaPredicted RBP15.18■□□□□ 0.02
GFRA3-201ENST00000274721 FAM104AQ969W3 186 aa15.18■□□□□ 0.02
GFRA3-201ENST00000274721 IGHV3-38A0A0C4DH36 116 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 SIVA1O15304 175 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 APOC4P55056 127 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 RPL36AP83881 106 aaKnown RBP15.17■□□□□ 0.02
GFRA3-201ENST00000274721 COTL1Q14019 142 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 BATFQ16520 125 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 RPL36ALQ969Q0 106 aaKnown RBP15.17■□□□□ 0.02
GFRA3-201ENST00000274721 IGLV4-3A0A075B6K6 122 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 HINT1P49773 126 aaPredicted RBP15.17■□□□□ 0.02
GFRA3-201ENST00000274721 PAPPA-AS1Q5QFB9 102 aa15.17■□□□□ 0.02
GFRA3-201ENST00000274721 A0A1B0GV90 55 aa15.16■□□□□ 0.02
GFRA3-201ENST00000274721 TRBV6-4A0A1B0GX49 114 aa15.16■□□□□ 0.02
GFRA3-201ENST00000274721 NPSP0C0P6 89 aa15.16■□□□□ 0.02
GFRA3-201ENST00000274721 EMP1P54849 157 aa15.16■□□□□ 0.02
GFRA3-201ENST00000274721 MPV17L2Q567V2 206 aa15.16■□□□□ 0.02
GFRA3-201ENST00000274721 C3orf56Q8N813 242 aa15.16■□□□□ 0.02
GFRA3-201ENST00000274721 C11orf86A6NJI1 115 aa15.15■□□□□ 0.02
GFRA3-201ENST00000274721 CRYBA4P53673 196 aa15.15■□□□□ 0.02
GFRA3-201ENST00000274721 UBE2D3P61077 147 aa15.15■□□□□ 0.02
GFRA3-201ENST00000274721 UBE2D2P62837 147 aa15.15■□□□□ 0.02
GFRA3-201ENST00000274721 SHISA2Q6UWI4 295 aa15.15■□□□□ 0.02
GFRA3-201ENST00000274721 DAZ4Q86SG3 579 aaKnown RBP15.15■□□□□ 0.02
GFRA3-201ENST00000274721 DAZ3Q9NR90 486 aaKnown RBP15.15■□□□□ 0.02
GFRA3-201ENST00000274721 FHL2Q14192 279 aa15.14■□□□□ 0.01
GFRA3-201ENST00000274721 TTTY13Q9BZ97 58 aa15.14■□□□□ 0.01
GFRA3-201ENST00000274721 COL5A1-AS1Q5SY13 56 aa15.14■□□□□ 0.01
GFRA3-201ENST00000274721 AMELXQ99217 191 aa15.14■□□□□ 0.01
GFRA3-201ENST00000274721 SPANXA1Q9NS26 97 aa15.14■□□□□ 0.01
GFRA3-201ENST00000274721 UBE2D4Q9Y2X8 147 aa15.14■□□□□ 0.01
GFRA3-201ENST00000274721 STAB1Q9NY15 2570 aa15.13■□□□□ 0.01
GFRA3-201ENST00000274721 C12orf54Q6X4T0 127 aa15.13■□□□□ 0.01
GFRA3-201ENST00000274721 VCX2Q9H322 139 aa15.13■□□□□ 0.01
GFRA3-201ENST00000274721 DEFB135Q30KP9 77 aa15.12■□□□□ 0.01
GFRA3-201ENST00000274721 ZMAT5Q9UDW3 170 aaKnown RBP15.12■□□□□ 0.01
GFRA3-201ENST00000274721 NBEAL2Q6ZNJ1 2754 aa15.12■□□□□ 0.01
GFRA3-201ENST00000274721 E9PLD3 99 aa15.12■□□□□ 0.01
GFRA3-201ENST00000274721 IGHV4-30-4P0DP06 118 aa15.12■□□□□ 0.01
GFRA3-201ENST00000274721 OXLD1Q5BKU9 147 aa15.12■□□□□ 0.01
GFRA3-201ENST00000274721 NFE4Q86UQ8 179 aa15.12■□□□□ 0.01
GFRA3-201ENST00000274721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.11■□□□□ 0.01
GFRA3-201ENST00000274721 TRGV4A0A0C4DH28 118 aa15.11■□□□□ 0.01
GFRA3-201ENST00000274721 IGKV2-29A2NJV5 120 aaPredicted RBP15.11■□□□□ 0.01
GFRA3-201ENST00000274721 BVES-AS1Q5T3Y7 98 aa15.11■□□□□ 0.01
GFRA3-201ENST00000274721 CEMP1Q6PRD7 247 aaPredicted RBP15.11■□□□□ 0.01
GFRA3-201ENST00000274721 GAGE12JA6NER3 117 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 GAGE1Q13065 139 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 GAGE4Q13068 117 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 GAGE5Q13069 117 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 GAGE13Q4V321 117 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 NTM-AS1Q6ZSK4 140 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 MAPKAPK5-AS1Q8N8E1 139 aa15.1■□□□□ 0.01
GFRA3-201ENST00000274721 DEFB130BP0DP73 79 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 DEFB130AP0DP74 79 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 OR11H2Q8NH07 326 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 HIGD1BQ9P298 99 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 TRAV8-6A0A0B4J262 113 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 TMEM97Q5BJF2 176 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 TIMM21Q9BVV7 248 aa15.09■□□□□ 0.01
GFRA3-201ENST00000274721 EGFEM1PQ0D2K5 195 aa15.08■□□□□ 0
GFRA3-201ENST00000274721 TRBV25-1A0A075B6N4 114 aa15.07■□□□□ 0
GFRA3-201ENST00000274721 LOC100131303A0A0U1RQF7 123 aa15.07■□□□□ 0
GFRA3-201ENST00000274721 LYRM9A8MSI8 78 aa15.07■□□□□ 0
GFRA3-201ENST00000274721 KRTAP10-11P60412 298 aa15.07■□□□□ 0
GFRA3-201ENST00000274721 GTSF1LQ9H1H1 148 aa15.07■□□□□ 0
GFRA3-201ENST00000274721 PRADC1Q9BSG0 188 aa15.07■□□□□ 0
GFRA3-201ENST00000274721 FAM222AQ5U5X8 452 aa15.06■□□□□ 0
GFRA3-201ENST00000274721 SBSPONQ8IVN8 264 aa15.06■□□□□ 0
GFRA3-201ENST00000274721 LINC00694P0DN24 101 aa15.05■□□□□ 0
GFRA3-201ENST00000274721 MRPS36P82909 103 aaKnown RBP15.05■□□□□ 0
GFRA3-201ENST00000274721 RNF183Q96D59 192 aa15.05■□□□□ 0
GFRA3-201ENST00000274721 CHAC1Q9BUX1 264 aa15.05■□□□□ 0
GFRA3-201ENST00000274721 TMEM170BQ5T4T1 132 aa15.05■□□□□ -0
GFRA3-201ENST00000274721 LURAP1LQ8IV03 231 aa15.05■□□□□ -0
GFRA3-201ENST00000274721 MAST4O15021 2626 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 IGHV4-28A0A0C4DH34 117 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 A0A0J9YXV3 536 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 MIFP14174 115 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 HSD52Q0P140 79 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 Q8NAQ8 132 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 Q6ZUT4 128 aa15.04■□□□□ -0
GFRA3-201ENST00000274721 CSDC2Q9Y534 153 aaKnown RBP15.04■□□□□ -0
GFRA3-201ENST00000274721 HERVK_113P61574 105 aa15.03■□□□□ -0
GFRA3-201ENST00000274721 MYMXA0A1B0GTQ4 84 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms