RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 DEFB112Q30KQ8 113 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 FAM236DA0A1B0GTK5 79 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 FAM236CP0DP71 79 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 SVIPQ8NHG7 77 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 KIR2DL5BQ8NHK3 375 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 F8P00451 2351 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 RNF138Q8WVD3 245 aa3.68□□□□□ -1.82
RC3H1-201ENST00000258349 AJUBAQ96IF1 538 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 TRAV26-1A0A087WT03 109 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 SPAG11BQ08648 103 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 SPRNQ5BIV9 151 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 HIST2H2BDQ6DRA6 164 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 ODF3L1Q8IXM7 274 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 PIEZO1Q92508 2521 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 TRAV23DV6A0A075B6W5 121 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 IGHV4OR15-8A0A075B7B6 117 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 A0A087WW49 117 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 F8W735 103 aaPredicted RBP3.67□□□□□ -1.82
RC3H1-201ENST00000258349 IGHV4-38-2P0DP08 117 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 UFSP1Q6NVU6 142 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 MSRB1Q9NZV6 116 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 P0C879 139 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 FANCD2OSQ96PS1 177 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 FAM110AQ9BQ89 295 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 H0Y9J4 135 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 IGFL2Q6UWQ7 119 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 IMUPQ9GZP8 106 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 LINC00574Q9H8X3 128 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 Q8N9W7 124 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 C10orf105Q8TEF2 133 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 BPY2O14599 106 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
RC3H1-201ENST00000258349 PKD1L2Q7Z442 2459 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 IGHV3-33P01772 117 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 NEXN-AS1Q8NBZ9 246 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 PIK3CD-AS1Q5SR53 167 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 NDUFA7O95182 113 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 MT-ATP8P03928 68 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 DEFB113Q30KQ7 82 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 NAV2Q8IVL1 2488 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 RNF183Q96D59 192 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 PRAC2D3DTV9 90 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 ZFAND2AQ8N6M9 145 aa3.66□□□□□ -1.82
RC3H1-201ENST00000258349 TIMM17BO60830 172 aa3.65□□□□□ -1.82
RC3H1-201ENST00000258349 A0A0J9YX75 114 aa3.65□□□□□ -1.82
RC3H1-201ENST00000258349 LYPD6Q86Y78 171 aa3.65□□□□□ -1.82
RC3H1-201ENST00000258349 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.82
RC3H1-201ENST00000258349 SPRY4Q9C004 299 aa3.65□□□□□ -1.82
RC3H1-201ENST00000258349 FAM240AA0A1B0GVK7 77 aa3.65□□□□□ -1.82
RC3H1-201ENST00000258349 MRPL55Q7Z7F7 128 aaKnown RBP3.65□□□□□ -1.82
RC3H1-201ENST00000258349 IGLC6P0CF74 106 aa3.65□□□□□ -1.83
RC3H1-201ENST00000258349 TRBV30A0A0K0K1B3 111 aa3.65□□□□□ -1.83
RC3H1-201ENST00000258349 TMEM223A0PJW6 202 aa3.65□□□□□ -1.83
RC3H1-201ENST00000258349 INSL3P51460 131 aa3.65□□□□□ -1.83
RC3H1-201ENST00000258349 USP9XQ93008 2570 aaPredicted RBP3.65□□□□□ -1.83
RC3H1-201ENST00000258349 IGKV2D-26A0A0A0MRZ7 120 aa3.65□□□□□ -1.83
RC3H1-201ENST00000258349 K7ERS5 55 aa3.65□□□□□ -1.83
RC3H1-201ENST00000258349 PRB2P02812 416 aaPredicted RBP3.65□□□□□ -1.83
RC3H1-201ENST00000258349 KLK5Q9Y337 293 aaPredicted RBP3.65□□□□□ -1.83
RC3H1-201ENST00000258349 IBA57-AS1B1ANH7 110 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 IGKV1D-37A0A075B6S9 117 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 SPRY2O43597 315 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 SPTSSBQ8NFR3 76 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 SMIM9A6NGZ8 99 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 COX17Q14061 63 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 GDF5OSQ5U4N7 250 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 LINC00467Q9BRT7 94 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 IGHV4-30-2A0A087WSY4 118 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 TRIAP1O43715 76 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 IGHV4-61A0A0C4DH41 118 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 LYRM9A8MSI8 78 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 ODF3BA8MYP8 253 aa3.64□□□□□ -1.83
RC3H1-201ENST00000258349 MRPS36P82909 103 aaKnown RBP3.64□□□□□ -1.83
RC3H1-201ENST00000258349 BLCAPP62952 87 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 YPEL4Q96NS1 127 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 IGLV2-8P01709 118 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 MYCNOSP40205 109 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 ENHOQ6UWT2 76 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 J3QKU1 62 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 FSTL3O95633 263 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 IGLV1-47P01700 117 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 CASC2Q6XLA1 102 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 DEFB135Q30KP9 77 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 PTH2Q96A98 100 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 CCDC140Q96MF4 163 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 KLK12Q9UKR0 248 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 ZFP36P26651 326 aaKnown RBP3.63□□□□□ -1.83
RC3H1-201ENST00000258349 GRNP28799 593 aaKnown RBP3.63□□□□□ -1.83
RC3H1-201ENST00000258349 EIF4EBP1Q13541 118 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-201ENST00000258349 DAZAP2Q15038 168 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-201ENST00000258349 SIRPDQ9H106 197 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 MAP6D1Q9H9H5 199 aa3.63□□□□□ -1.83
RC3H1-201ENST00000258349 TP73-AS1Q9UF72 201 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms