RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 TCL1BO95988 128 aa12.57□□□□□ -0.4
FOXA1-201ENST00000250448 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
FOXA1-201ENST00000250448 CFC1P0CG37 223 aa12.57□□□□□ -0.4
FOXA1-201ENST00000250448 ZNF876PQ49A33 203 aa12.57□□□□□ -0.4
FOXA1-201ENST00000250448 PTH2Q96A98 100 aa12.57□□□□□ -0.4
FOXA1-201ENST00000250448 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
FOXA1-201ENST00000250448 FN1P02751 2386 aaKnown RBP12.57□□□□□ -0.4
FOXA1-201ENST00000250448 KHDC1LQ5JSQ8 128 aa12.56□□□□□ -0.4
FOXA1-201ENST00000250448 TEX29Q8N6K0 151 aa12.56□□□□□ -0.4
FOXA1-201ENST00000250448 WNK1Q9H4A3 2382 aa12.56□□□□□ -0.4
FOXA1-201ENST00000250448 PPDPFLQ8WWR9 84 aa12.56□□□□□ -0.4
FOXA1-201ENST00000250448 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
FOXA1-201ENST00000250448 AMELXQ99217 191 aa12.56□□□□□ -0.4
FOXA1-201ENST00000250448 DAZ1Q9NQZ3 744 aaKnown RBP12.56□□□□□ -0.4
FOXA1-201ENST00000250448 TRBV27A0A0K0K1C4 114 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 LGALS9O00182 355 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 TEN1Q86WV5 123 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 C10orf126Q8N4M7 172 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 ANAPC13Q9BS18 74 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 J3QQQ9 107 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 FHL3Q13643 280 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 TRAV12-3A0A0B4J271 114 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 Q8N2B8 174 aa12.55□□□□□ -0.4
FOXA1-201ENST00000250448 LGALS3P17931 250 aaKnown RBP12.54□□□□□ -0.4
FOXA1-201ENST00000250448 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
FOXA1-201ENST00000250448 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
FOXA1-201ENST00000250448 CSDC2Q9Y534 153 aaKnown RBP12.54□□□□□ -0.4
FOXA1-201ENST00000250448 SBSPONQ8IVN8 264 aa12.53□□□□□ -0.4
FOXA1-201ENST00000250448 TMEM86BQ8N661 226 aa12.53□□□□□ -0.4
FOXA1-201ENST00000250448 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
FOXA1-201ENST00000250448 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
FOXA1-201ENST00000250448 ELANEP08246 267 aa12.53□□□□□ -0.4
FOXA1-201ENST00000250448 PRO1854Q9UHT4 67 aa12.53□□□□□ -0.4
FOXA1-201ENST00000250448 C9orf85Q96MD7 179 aa12.52□□□□□ -0.4
FOXA1-201ENST00000250448 A8MWV9 139 aa12.52□□□□□ -0.41
FOXA1-201ENST00000250448 INAFM1C9JVW0 142 aa12.52□□□□□ -0.41
FOXA1-201ENST00000250448 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
FOXA1-201ENST00000250448 DCANP1Q8TF63 244 aa12.52□□□□□ -0.41
FOXA1-201ENST00000250448 ZNF56Q15929 161 aa12.52□□□□□ -0.41
FOXA1-201ENST00000250448 NSUN5P1Q3KNT7 163 aa12.52□□□□□ -0.41
FOXA1-201ENST00000250448 SORL1Q92673 2214 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 IGHV3-16A0A0C4DH30 117 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 MT-ATP8P03928 68 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 SPINK8P0C7L1 97 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 RHOHQ15669 191 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 SCGB1C2P0DMR2 95 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 Q6ZUT4 128 aa12.51□□□□□ -0.41
FOXA1-201ENST00000250448 BAHCC1Q9P281 2608 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 TMEM89A2RUT3 159 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 LEPROTO15243 131 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 OPRPNQ99935 248 aaPredicted RBP12.5□□□□□ -0.41
FOXA1-201ENST00000250448 F8P00451 2351 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 JMJD1CQ15652 2540 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 A0A1W2PRX2 142 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 TMEM223A0PJW6 202 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 K7EMT4 169 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 M0QY20 66 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 XGP55808 180 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 UBE2E2Q96LR5 201 aa12.5□□□□□ -0.41
FOXA1-201ENST00000250448 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
FOXA1-201ENST00000250448 SLURP1P55000 103 aa12.49□□□□□ -0.41
FOXA1-201ENST00000250448 ANKRD29Q8N6D5 301 aa12.49□□□□□ -0.41
FOXA1-201ENST00000250448 MDFICQ9P1T7 246 aa12.49□□□□□ -0.41
FOXA1-201ENST00000250448 C2CD3Q4AC94 2353 aa12.48□□□□□ -0.41
FOXA1-201ENST00000250448 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
FOXA1-201ENST00000250448 TRPT1Q86TN4 253 aaKnown RBP12.48□□□□□ -0.41
FOXA1-201ENST00000250448 TRAV12-2A0A075B6T6 113 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 EIF4EBP3O60516 100 aaPredicted RBP12.47□□□□□ -0.41
FOXA1-201ENST00000250448 ZNF688P0C7X2 276 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
FOXA1-201ENST00000250448 RNF152Q8N8N0 203 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 IGHV3-33P01772 117 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 RNASE1P07998 156 aaKnown RBP12.47□□□□□ -0.41
FOXA1-201ENST00000250448 P0DMU3 169 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
FOXA1-201ENST00000250448 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
FOXA1-201ENST00000250448 CD28P10747 220 aa12.46□□□□□ -0.41
FOXA1-201ENST00000250448 Q8N1Y9 231 aa12.46□□□□□ -0.41
FOXA1-201ENST00000250448 LINC01006Q8NI28 216 aa12.46□□□□□ -0.41
FOXA1-201ENST00000250448 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
FOXA1-201ENST00000250448 TEP1Q99973 2627 aaKnown RBP12.46□□□□□ -0.41
FOXA1-201ENST00000250448 TRAV2A0A0B4J234 112 aa12.46□□□□□ -0.42
FOXA1-201ENST00000250448 HILS1P60008 231 aa12.46□□□□□ -0.42
FOXA1-201ENST00000250448 C20orf203Q8NBC4 194 aa12.46□□□□□ -0.42
FOXA1-201ENST00000250448 IGHV3-64A0A075B6Q5 118 aa12.45□□□□□ -0.42
FOXA1-201ENST00000250448 A0A0B4J2C4 111 aa12.45□□□□□ -0.42
FOXA1-201ENST00000250448 RHODO00212 210 aa12.45□□□□□ -0.42
FOXA1-201ENST00000250448 WIPF1O43516 503 aa12.45□□□□□ -0.42
FOXA1-201ENST00000250448 A0A0J9YX75 114 aa12.45□□□□□ -0.42
FOXA1-201ENST00000250448 SLC25A20O43772 301 aa12.45□□□□□ -0.42
FOXA1-201ENST00000250448 IGHV1OR15-1A0A075B7D0 117 aa12.44□□□□□ -0.42
FOXA1-201ENST00000250448 MUSTN1Q8IVN3 82 aa12.44□□□□□ -0.42
FOXA1-201ENST00000250448 IGLV4-3A0A075B6K6 122 aa12.44□□□□□ -0.42
FOXA1-201ENST00000250448 A0A0J9YXV3 536 aa12.44□□□□□ -0.42
FOXA1-201ENST00000250448 C9JAW5 83 aa12.44□□□□□ -0.42
FOXA1-201ENST00000250448 I3L3M4 83 aa12.44□□□□□ -0.42
FOXA1-201ENST00000250448 CCDC179H3BU77 68 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms