RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 HSD52Q0P140 79 aa3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 MRPL51Q4U2R6 128 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 C1orf158Q8N1D5 194 aa3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 PRSS3P2Q8NHM4 247 aa3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 MAP6D1Q9H9H5 199 aa3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 NACAE9PAV3 2078 aa3.97□□□□□ -1.77
TRAPPC13-201ENST00000231526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 NCR2O95944 276 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 LINC00694P0DN24 101 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 HLA-DRB4P13762 266 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 PMCHL1Q16048 86 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 GAGE13Q4V321 117 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 CARD19Q96LW7 228 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 PRELID3AQ96N28 172 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 ODF3Q96PU9 254 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 ZNF256Q9Y2P7 627 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 HLA-DRB4X5D2U9 266 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 TRAV2A0A0B4J234 112 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 H3BMM0 161 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 NHLRC4P0CG21 123 aaPredicted RBP3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 FGF6P10767 208 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 RNASE3P12724 160 aaKnown RBP3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 OR5A1Q8NGJ0 315 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 TP73-AS1Q9UF72 201 aa3.96□□□□□ -1.78
TRAPPC13-201ENST00000231526 IFI27P40305 119 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 CACNG7P62955 275 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 PAPPA-AS1Q5QFB9 102 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 AMTNQ6UX39 209 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 KIR2DL4Q99706 377 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGHV1OR15-1A0A075B7D0 117 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 NPYP01303 97 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 KRTAP10-3P60369 221 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 ODF3L2Q3SX64 289 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 NDUFA11Q86Y39 141 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 C14orf178Q8N769 122 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 RNF185Q96GF1 192 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 URB1-AS1Q96HZ7 61 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 PRADC1Q9BSG0 188 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 MAST4O15021 2626 aa3.95□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGHV4-4A0A075B6R2 117 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 TRAV26-2A0A0B4J265 109 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 LYRM9A8MSI8 78 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 GAS8-AS1O95177 125 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 AP1S3Q96PC3 154 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 EDA2RQ9HAV5 297 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 STAB1Q9NY15 2570 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGHV1-24A0A0C4DH33 117 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 H7C1H1 209 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGLV1-51P01701 117 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 MGPP08493 103 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 OVOL2Q9BRP0 275 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 DPH3P1Q9H4G8 78 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 XCL2Q9UBD3 114 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 U3KQK5 164 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 NBEAL2Q6ZNJ1 2754 aa3.94□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGHV3OR16-12A0A075B7B8 117 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RBMY1BA6NDE4 496 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RBMY1EA6NEQ0 496 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 PRM2P04554 102 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RBMY1DP0C7P1 496 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 MED14OSP0DP75 135 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGLL1P15814 213 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 FAM74A4Q5TZK3 123 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 C9orf85Q96MD7 179 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 WWC2-AS2Q96NR7 200 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 JPT2Q9H910 190 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 SCRT2Q9NQ03 307 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 IGHV3-16A0A0C4DH30 117 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 CCDC179H3BU77 68 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RBMY1CP0DJD4 496 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 RBMY1FQ15415 496 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 Q5XG85 94 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 SPATA12Q7Z6I5 190 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 LINC01587Q99440 93 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 WFDC10AQ9H1F0 79 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 COL6A5A8TX70 2615 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 TRGV11A0A075B6L2 103 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 ZNF876PQ49A33 203 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 PLEKHB2Q96CS7 222 aa3.93□□□□□ -1.78
TRAPPC13-201ENST00000231526 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 A8MTW9 85 aa3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 INSP01308 110 aa3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 MPV17L2Q567V2 206 aa3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 MRPS16Q9Y3D3 137 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 FBN1P35555 2871 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-201ENST00000231526 CMC4P56277 68 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms