RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 A8MWV9 139 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 PROK1P58294 105 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 LRRC75A-AS1Q8N1F1 130 aa9.05□□□□□ -0.96
CHPF2-201ENST00000035307 TRAV8-3A0A0A6YYJ7 113 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 C11orf86A6NJI1 115 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 MRAPQ8TCY5 172 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 ZFAND2AQ8N6M9 145 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 C20orf78Q9BR46 151 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
CHPF2-201ENST00000035307 ZNF493Q6ZR52 646 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 RASL10AQ92737 203 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 PAX4O43316 350 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 FOXI2Q6ZQN5 318 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 TSSC4Q9Y5U2 329 aaPredicted RBP9.03□□□□□ -0.96
CHPF2-201ENST00000035307 A0A0J9YY99 117 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
CHPF2-201ENST00000035307 K7EP34 96 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 FGF6P10767 208 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 H3BUA1 57 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 PRB2P02812 416 aaPredicted RBP9.02□□□□□ -0.97
CHPF2-201ENST00000035307 PSMB8P28062 276 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 A0A0J9YX75 114 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 NXPH4O95158 308 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
CHPF2-201ENST00000035307 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
CHPF2-201ENST00000035307 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
CHPF2-201ENST00000035307 MALP21145 153 aa9.01□□□□□ -0.97
CHPF2-201ENST00000035307 WFDC2Q14508 124 aa9.01□□□□□ -0.97
CHPF2-201ENST00000035307 MAPKAPK5-AS1Q8N8E1 139 aa9.01□□□□□ -0.97
CHPF2-201ENST00000035307 SNCGO76070 127 aa9□□□□□ -0.97
CHPF2-201ENST00000035307 C6orf226Q5I0X4 101 aa9□□□□□ -0.97
CHPF2-201ENST00000035307 GPHB5Q86YW7 130 aa9□□□□□ -0.97
CHPF2-201ENST00000035307 LINC00482Q8N8I6 264 aa9□□□□□ -0.97
CHPF2-201ENST00000035307 TRBV6-1A0A0K0K1D8 114 aa8.99□□□□□ -0.97
CHPF2-201ENST00000035307 TMEM141Q96I45 108 aa8.99□□□□□ -0.97
CHPF2-201ENST00000035307 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
CHPF2-201ENST00000035307 TTC32Q5I0X7 151 aa8.98□□□□□ -0.97
CHPF2-201ENST00000035307 NSD1Q96L73 2696 aaPredicted RBP8.98□□□□□ -0.97
CHPF2-201ENST00000035307 F5H768 121 aa8.98□□□□□ -0.97
CHPF2-201ENST00000035307 CFAP161Q6P656 301 aa8.98□□□□□ -0.97
CHPF2-201ENST00000035307 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
CHPF2-201ENST00000035307 PTH2Q96A98 100 aa8.98□□□□□ -0.97
CHPF2-201ENST00000035307 IGLL5B9A064 214 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 RHODO00212 210 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 BSNQ9UPA5 3926 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 IGLV10-54A0A075B6I4 117 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 A4D1N5 150 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 TSPAN13O95857 204 aa8.97□□□□□ -0.97
CHPF2-201ENST00000035307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
CHPF2-201ENST00000035307 A8MZ25 164 aa8.96□□□□□ -0.97
CHPF2-201ENST00000035307 IGLV1-40P01703 118 aa8.96□□□□□ -0.97
CHPF2-201ENST00000035307 RNASE3P12724 160 aaKnown RBP8.96□□□□□ -0.97
CHPF2-201ENST00000035307 MORN3Q6PF18 240 aaPredicted RBP8.96□□□□□ -0.97
CHPF2-201ENST00000035307 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.97
CHPF2-201ENST00000035307 Q9H8V8 135 aa8.96□□□□□ -0.98
CHPF2-201ENST00000035307 XCL1P47992 114 aa8.96□□□□□ -0.98
CHPF2-201ENST00000035307 CKS1BP61024 79 aa8.96□□□□□ -0.98
CHPF2-201ENST00000035307 SPAG8Q99932 426 aaPredicted RBP8.96□□□□□ -0.98
CHPF2-201ENST00000035307 K7EMT4 169 aa8.95□□□□□ -0.98
CHPF2-201ENST00000035307 K7EQG2 157 aa8.95□□□□□ -0.98
CHPF2-201ENST00000035307 TOMM6Q96B49 74 aa8.95□□□□□ -0.98
CHPF2-201ENST00000035307 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.95□□□□□ -0.98
CHPF2-201ENST00000035307 Q6ZTI0 123 aa8.95□□□□□ -0.98
CHPF2-201ENST00000035307 C2orf91Q6ZV80 131 aa8.95□□□□□ -0.98
CHPF2-201ENST00000035307 MUSTN1Q8IVN3 82 aa8.95□□□□□ -0.98
CHPF2-201ENST00000035307 RS1O15537 224 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 TMEM243Q9BU79 118 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 C1QTNF4Q9BXJ3 329 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 DEFB135Q30KP9 77 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 NRACQ8N912 160 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 C4orf3Q8WVX3 66 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 MAP6D1Q9H9H5 199 aa8.94□□□□□ -0.98
CHPF2-201ENST00000035307 A0A096LNJ9 63 aa8.93□□□□□ -0.98
CHPF2-201ENST00000035307 SIVA1O15304 175 aa8.93□□□□□ -0.98
CHPF2-201ENST00000035307 CRPP02741 224 aa8.93□□□□□ -0.98
CHPF2-201ENST00000035307 DEFB114Q30KQ6 69 aa8.93□□□□□ -0.98
CHPF2-201ENST00000035307 Q6ZUT4 128 aa8.93□□□□□ -0.98
CHPF2-201ENST00000035307 ZFHX3Q15911 3703 aa8.92□□□□□ -0.98
CHPF2-201ENST00000035307 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
CHPF2-201ENST00000035307 H3BMM0 161 aa8.92□□□□□ -0.98
CHPF2-201ENST00000035307 SCGB1A1P11684 91 aa8.91□□□□□ -0.98
CHPF2-201ENST00000035307 HILS1P60008 231 aa8.91□□□□□ -0.98
CHPF2-201ENST00000035307 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
CHPF2-201ENST00000035307 C20orf203Q8NBC4 194 aa8.91□□□□□ -0.98
CHPF2-201ENST00000035307 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
CHPF2-201ENST00000035307 DAD1P61803 113 aa8.91□□□□□ -0.98
CHPF2-201ENST00000035307 TRAV8-4A0A0B4J246 113 aa8.9□□□□□ -0.98
CHPF2-201ENST00000035307 E9PLD3 99 aa8.9□□□□□ -0.98
CHPF2-201ENST00000035307 RHOHQ15669 191 aa8.9□□□□□ -0.98
CHPF2-201ENST00000035307 ATXN8Q156A1 80 aa8.9□□□□□ -0.99
CHPF2-201ENST00000035307 COPS9Q8WXC6 57 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms