RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 D730048I06RikQ9CQB8 106 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 GgctQ9D7X8 188 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Igkv4-71A0A0G2JEH0 117 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Igkv6-25A0A140T8N7 115 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gpr82Q8BZR0 328 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ighv5-9A0A075B5Q2 117 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Nhlrc4Q3UP44 136 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ly6g6eQ8K1T6 166 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prr14lE9Q7C4 1971 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Znrf1Q91V17 227 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ighv8-9A0A0G2JET1 119 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 GaptQ8CB93 157 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Sfxn3Q91V61 321 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Arhgap21Q6DFV3 1944 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trav18A0A075B656 109 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cela1Q91X79 266 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gnb1lQ9EQ15 326 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 Tcrg-V1P06325 135 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 G6pc2Q9Z186 355 aa10.1□□□□□ -0.79
Trim56-201ENSMUST00000054384 PtprfA2A8L5 1898 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Smad7O35253 426 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 H2-DMb2Q31099 261 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr1173Q7TR24 312 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr223Q8VF69 319 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Slc25a15Q9WVD5 301 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 eef1akmt3D3YWP0 232 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Nabp1Q8BGW5 198 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Spink6Q8BT20 105 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cd8bP10300 213 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Glrx5Q80Y14 152 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm10799F7C7U2 104 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Srsf6Q3TWW8 339 aaKnown RBP10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 VwceQ3U515 929 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Itgbl1Q8VDV0 494 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr1199Q8VF94 310 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Phpt1Q9DAK9 124 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prss57Q14B24 284 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Srsf1Q6PDM2 248 aaKnown RBP10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Znf524Q9D0B1 321 aa10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prpf8Q99PV0 2335 aaKnown RBP10.09□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gstp2P46425 210 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Pax8Q00288 457 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Adra2aQ01338 450 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Slc25a35Q5SWT3 300 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ucp1P12242 307 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Slamf6Q9ET39 351 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trav7-4A0A075B6C1 113 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trav7d-4Q5R1H9 113 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gpx7Q99LJ6 186 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Rtn4rl2Q7M6Z0 420 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Nrn1Q8CFV4 142 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Sumo3Q9Z172 110 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmem100Q9CQG9 134 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Samd13D3YUG0 102 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm5819E9PZ96 154 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ifitm7G3X9Z2 141 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Q9DAZ5 108 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Olfr1369-ps1A0A140T8K7 317 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Zic3Q62521 466 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Olfr491Q8VG06 310 aa10.08□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm4881A0A140LIR9 352 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Igkv4-51A0N8I8 119 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 MalO09198 153 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mpv17P19258 176 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 AdoQ6PDY2 256 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ncor2Q9WU42 2472 aaKnown RBP10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trav12d-1A0N8R0 115 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm933J3QPC1 141 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 D430019H16RikJ3QPM6 83 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ca2P00920 260 aaKnown RBP10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mcrip2Q9CQB2 160 aaKnown RBP10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 CrebbpP45481 2441 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ighv1-15A0A0A6YXA5 117 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm29644A0A087WPG2 191 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ighv9-3A0A0B4J1J5 117 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 MrapQ9D159 127 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Sh2d6Q9D413 297 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Efemp2Q9WVJ9 443 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Igkv10-95A0A0G2JFY3 115 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ly6aP05533 134 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Loxl4Q924C6 757 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 TirapQ99JY1 241 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm5615Q3UW02 101 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Vgll4Q80V24 287 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mbnl2Q8C181 373 aaKnown RBP10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmem91Q8C581 172 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gtf3aQ8VHT7 364 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 A0A1Y7VMQ4 148 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Frrs1lB1AXV0 293 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Olfr263Q7TQT8 317 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Q8CF25 301 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 GgnQ80WJ1 673 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tomm7Q9D173 55 aa10.07□□□□□ -0.8
Trim56-201ENSMUST00000054384 Rnf151Q9CQ29 239 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm45871A0A1B0GRI9 540 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Otx1P80205 355 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Stac2Q8R1B0 408 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mrpl36Q99N90 102 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Rnf115Q9D0C1 305 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Efna2P52801 209 aa10.06□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 88.6 ms